| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_3534 |
|---|
| Symbol | |
|---|
| ID | 4186588 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | - |
|---|
| Start bp | 4089902 |
|---|
| End bp | 4090579 |
|---|
| Gene Length | 678 bp |
|---|
| Protein Length | 225 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 638073521 |
|---|
| Product | two-component system response regulator |
|---|
| Protein accession | YP_680110 |
|---|
| Protein GI | 110639900 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.524315 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATTT TAGTGATCGA AGATGAAGTT TCCATGCAGG AAATAGTTCA GGAAACACTC
GAAAAGGAAT TGTATGTTGT AGAATCAGCA ACCACGTATC AGAGCGCTTT GGACAAAATT
ATTTCGTTTG ATTACGATTG TATTTTACTT GATATTATGC TGCCCGATGG AAGTGGTTTT
GATATTTTAA AAGAATTGAA ACGGCTTGAC AAAGCAAGTA ACGTCATTAT TATTTCAGCA
AAAAATTCTA TTGAAGATAA AGTTGCAGGA CTTAATCTTG GTGCGGATGA TTATTTAATC
AAGCCCTTTC ATATTGCGGA ACTAACAGCA CGCGTTAAAT CTGTGCTTAG GAGAAAAACA
TTGAAGGGGA AAAATGAACT CGAGATCAAC AATGTTAAGA TTCAGTTTGA AGACCGCGTT
GCGTTTATAA ACAATGAACC TATTGCACTG AACAGAAAAG AGTTTGACGT GCTGGCTTAT
TTTATGGTAA ACAAAAACAG GCTCATAAAT AAAACTTCTT TAGCCGAACA TGTATGGGGC
GACTTTACCG ATGAATCAGA TGATTTTGAA TTCATTTATT CGCAAATAAA AAATCTGCGT
AAAAAATTAA AGGATCAACA AGCTGCAATC GAAATTCAGG CAGTTTACGG CATTGGTTAT
AAGCTTATCG CTTTATGA
|
|---|
| Protein sequence | MKILVIEDEV SMQEIVQETL EKELYVVESA TTYQSALDKI ISFDYDCILL DIMLPDGSGF
DILKELKRLD KASNVIIISA KNSIEDKVAG LNLGADDYLI KPFHIAELTA RVKSVLRRKT
LKGKNELEIN NVKIQFEDRV AFINNEPIAL NRKEFDVLAY FMVNKNRLIN KTSLAEHVWG
DFTDESDDFE FIYSQIKNLR KKLKDQQAAI EIQAVYGIGY KLIAL
|
|---|
| |