| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_3530 |
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| Symbol | rsaD |
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| ID | 4186584 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 4085410 |
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| End bp | 4087182 |
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| Gene Length | 1773 bp |
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| Protein Length | 590 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638073517 |
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| Product | ABC transporter, ATP-binding/permease |
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| Protein accession | YP_680106 |
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| Protein GI | 110639896 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.672415 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCTCTGA ATATACATTC TATATCTATA ATGGAAAAAA AGAAAAATAA AGTAACACTT
GCGCAGGTTT TCAAAACATT TATTTGGCCA CGAAGAACAA TCCTGTTGAT CGGTTTAATC
ATGATTATTA TAAGCCGGTT GGCCAGCCTT GTTTTACCGG GAGCCAGCAA ATATTTACTG
GATGATGTTG TGGCCAATAA AGACATCGAT ATGCTTTATA CGCTGCTTTG GGTTGTTGGT
TTATCGATTG CGGTAAATGC TGCCATGTCT TTTTTACTGA CAAAACTATT AAGTGTGGAA
GCACAATTGC TGATTTCAAA ATTACGTGTG CAGGTGCAGC GTAAAATTCT GGGTTTACCC
ATCAGTTATT TCGATAATAA TAAATCAGGC GCTTTGGTAT CCCGGATCAT GACGGATGTA
GAAGGGGTAC GAAACCTGAT CGGTACGGGT TTGGTTCAGC TGATCGGAGG AACAATTACG
TCGGTAATCG CGCTTATACT GCTGATAAAA ATCAGTCCCG TTATGACGGT ATATGTTTTG
CTGCCGGTAG CTATTTTTGC GTTCATTGCG ATGAAAGCAT TCGGATACAT CCGCCCGATC
TTTAAAGAGC GGGGTATAAT AAATGCAGAT GTAACCGGCC GGTTAACGGA AACTTTAAAC
GGTGTCCGCA TCATTAAAGG GTTTAACGCA GAAGAGCAGG AAAACAAAAC GTTTGAAGCA
GGTGTGGAAC GCTTGTTTGA TAATGTGAAA AAAAGTTTAA CCTCTACGTC ACTAATAACC
AGCGCTTCGT TATTTCTCCT GGGTATGGCA ACATTAGGTA TCATGGGCAT CGGCGGTTAC
TTAATGATTA AAGGTGAAAT GACCAGCGGT GATTTTCTTT CGTTCACGTT ATATCTTGGT
TTTATGATTG CGCCGATCGT TCAGATGAGT AATATCGGAA GCCAGCTGAC AGAGGCCTTT
GCCGGCTTGG ATCGTACGGA AGAAATCATG AATATGGACC CGGAAGAGGA TACTGAAAAA
CGGAAAACGG TATTGAAGGA AATTAAAGGA GACGTTACCT TTGATGGTGT TTCGTTTGCG
TATCAGGAAG GAAAAGAAGT ATTACACGAT GTAAGCTTTG ATGCTCCTGC GGGAACGGTT
ACGGCGCTTG TTGGCACGTC AGGTTCAGGT AAATCAACCA TTGCCGGTTT GGTTGCTACG
TTCCTGAATC CTGAATCAGG AAAAATCACG ATTGATGGAG TAGATTTATC CGAAGTTACG
TTGAGCAGCT ATCGCAAAAA TTTAGGAGTG GTCTTACAGG ATGATTTTCT GTTTGAAGGA
ACGATCAGAG AAAACATTTT ATTTCCACGG CCAAATGCAA CCGAAGAACA ACTGCTCAAT
GCCGTGAAAG CAGGGTATGT AAATGAATTT ACAGACCGTT TTGAAAAAGG GCTGGACACA
TTAATTGGAG AGCGTGGCGT TAAATTATCA GGCGGGCAGC GTCAGCGGAT TGCAATAGCA
CGTGCGATAC TGGCAGATCC TAAAATTATT ATTCTGGATG AAGCAACCTC AAATCTTGAT
ACGCAAAGCG AATCGCTGAT CCAGCAGAGC TTAGCTGAGT TAATGAAAGG CAGGACAACA
TTTGTGATTG CACACAGGTT AAGCACGATC AGGCAGGCTA ACCAGATTCT GGTAATTGAA
AACGGAAAAA TTGCCGAACA GGGAAGCCAT GCAGAATTGA TTGCAAAAGA AGGACGGTAT
TATGAACTGC ATACATACCA GGCAAGAATT TAA
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| Protein sequence | MSLNIHSISI MEKKKNKVTL AQVFKTFIWP RRTILLIGLI MIIISRLASL VLPGASKYLL
DDVVANKDID MLYTLLWVVG LSIAVNAAMS FLLTKLLSVE AQLLISKLRV QVQRKILGLP
ISYFDNNKSG ALVSRIMTDV EGVRNLIGTG LVQLIGGTIT SVIALILLIK ISPVMTVYVL
LPVAIFAFIA MKAFGYIRPI FKERGIINAD VTGRLTETLN GVRIIKGFNA EEQENKTFEA
GVERLFDNVK KSLTSTSLIT SASLFLLGMA TLGIMGIGGY LMIKGEMTSG DFLSFTLYLG
FMIAPIVQMS NIGSQLTEAF AGLDRTEEIM NMDPEEDTEK RKTVLKEIKG DVTFDGVSFA
YQEGKEVLHD VSFDAPAGTV TALVGTSGSG KSTIAGLVAT FLNPESGKIT IDGVDLSEVT
LSSYRKNLGV VLQDDFLFEG TIRENILFPR PNATEEQLLN AVKAGYVNEF TDRFEKGLDT
LIGERGVKLS GGQRQRIAIA RAILADPKII ILDEATSNLD TQSESLIQQS LAELMKGRTT
FVIAHRLSTI RQANQILVIE NGKIAEQGSH AELIAKEGRY YELHTYQARI
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