| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_3525 |
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| Symbol | lhr |
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| ID | 4183548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 4079677 |
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| End bp | 4082118 |
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| Gene Length | 2442 bp |
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| Protein Length | 813 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638073512 |
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| Product | ATP-dependent helicase |
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| Protein accession | YP_680101 |
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| Protein GI | 110639891 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1201] Lhr-like helicases |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.790259 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACAAA AAGAAATACT TGCCTGGTTT AAAAATCAAA AATGGAAACC GCACCTGTTT
CAGCAGGATA CCTGGAAGGC CATGCTGGAA GGCTATTCCG GACTGGTTAA TGCACCAACG
GGAAGCGGTA AAACGTATTC TGTATGGTTT GGGATTTTGT TGGAATACCT GCAAAAACAT
CCCGATTATA AAACAAAAAC AAAGCAAGGC CTGCAAGCGA TCTGGATCAC GCCGATCCGG
GCGCTGGCCA AAGAGATTGA ATATTCAACA AAACGTTCCT GCATAGATCT GGATATTCCC
TTTGAAGTAG CCATACGCAG CGGGGATACG ACTTCCGCAC AAAAAACAAA ACAGAAAAAA
AACATGCCGC AGCTGCTGGT AACCACACCG GAAAGTTTGC ACCTGTTGCT TTCACAAAAA
GGCTATGCGG ATGTATTTAA AAATCTGTCG ACCGTAGTGG TAGATGAATG GCATGAACTG
ATCGGGTCTA AACGCGGTGT TCAGATGGAA CTTGCCTTAT CTCGGCTGAA AGGATTAAAT
CCGATGCTGA AGATCTGGGG AATCTCTGCA ACCATAGGCA ACCTGGAAGA AGCCAAGGAT
GTGCTGCTTG GTAAGTATGG AAACCCGACA AAGATGATCC GTGCAGAATT GCCGAAGCGG
GTTGAGATCG AAACCGTATT TCCCGATAAA ATCGAAAACT TTCCCTGGTC GGGTTTTGTA
GGAACGAAGC TGGTACCCAA AGTAATACCG ATCATACATA ATAGTCATTC TGTTTTAATT
TTTACCAATA CCCGTTCACA ATCTGAGATC TGGTACCGGC AGCTGCTGGA CGTGGCGCCG
GAATTTGCCG GGCTAATTGC ACTGCACCAC GGTTCCCTGG ATCAGAAGAC ACGTACCTGG
GTAGAAGATA ACCTGCATGC AGGAAAATTA AAAGCGGTGA TCTGTACATC CAGTTTAGAC
TTAGGTGTAG ATTTCAGTGC AGTTGATACG GTAGTTCAGG TAGGAAGTCC CAAAGGAGTT
GCGCGGTTTA TGCAACGGGC GGGCAGGAGC GGCCACAGTC CGGGTGCGTT GAGTAAGATC
TATTTTGTGC CGACCAATTC ACTTGAGATC ATTGAAGGCG CTGCTATGCG CGAAGCCATC
AAACGCAATG TGGTAGAGAG CCGTGTTCCC TATGTCAGAA GCTTTGATGT GCTGGTACAA
TACCTGGTAA CGCTGGCCGT ATCGGATGGT TTCCGGCCGG AAATTATTTA CGAAGAAATT
AAAAAAACAT TTTGTTATGC CAGTGTAACC CCGGAAGAAT TTGCCTGGGC TCTGCAATTC
ATTACCAACG GGGGCAACTC ACTTGATGCA TACGACGAGT TTCATAAAGT AATTATTGAA
GAAGGTATTT ATAAAGTAAC GAGCCGCGCC ATTGCCACCA GGCACCGGCT TTCCATGGGT
ACCATCGTAA GCGATTCTGC CATGCAGGTG AAATACATGA GCGGGAAACG GCTGGGCAGT
ATTGAAGAAA GTTTCATTTC AAAATTAAAA CCCGGAGACG TATTCTGGTT CTCCGGAAAT
AACCTGGAGA TCGTACACAT TCACCACATG GATGTGCTGG TACGGAAAAG TAAAGCAAAA
AAAGGAATGA TCCCGAGCTG GCAGGGCGGG CGTATGCCTT TGTCTTCTCA GCTTGCCGAA
ATGATCCGCT ATAAGATCGA TCATTTTTTT GATGCCGGTG CAATTGAAGA AGAAGAACTT
AATAAACTAA AAGAACTGTT TGACCTGCAG GCGAAACGTT CGCACTTACC GACCAATAAA
GAATTTCTGA TCGAGTATGT ACAGAGCCGC GAAGGATATC ATGTATTTAT GTATCCGTTT
GAAGGCAGGT TTGTACACGA AGGAATGGCG GCGATTGTAT CGCATAAAAT TTCGGAAATC
CAGCCTATAA CGTTTTCGGT GGCGATGAAT GATTATGGGT TTGAATTATT ATCCGATCAG
GAAATTCCGA TTGAAGAAGC ATTGGAGCTT GATCTGTTTA ATATTGACAA TCTGGAAAAA
GAAATTCAGT TAAGTGTAAA TGCAACTGAG ATGGCGCGCC GCCGCTTCCG CGAAATTGCT
TCTATCGCCG GACTGGTATT TCAGGGCTAT CCCGGAAAAT CTGCGAAGAC ACGGCACCTG
CAGGCCAATG CCGAATTGTT TTTCAAAGTA TTTGAACAAT ATGACAGCAA TAATCTGTTA
TTGCGGCAGG CATATGATGA AGTGCTGGAT TTTCAGTTAG AGATCCGCCG GATGCGTAAA
GCCTATAACC GTATTAATGA GCAGAAGCTT GTACTGGTAA GGCCTGACAA ACCAACACCG
TTTGCATACC CGATCATGGT CGACCGCATG CGCGGGAAGT TCAGCAATGA AAAACTGGAG
GACCGTTTAT TTAAAATGAA AACACAACTG GAAAAAGAAT AA
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| Protein sequence | MTQKEILAWF KNQKWKPHLF QQDTWKAMLE GYSGLVNAPT GSGKTYSVWF GILLEYLQKH
PDYKTKTKQG LQAIWITPIR ALAKEIEYST KRSCIDLDIP FEVAIRSGDT TSAQKTKQKK
NMPQLLVTTP ESLHLLLSQK GYADVFKNLS TVVVDEWHEL IGSKRGVQME LALSRLKGLN
PMLKIWGISA TIGNLEEAKD VLLGKYGNPT KMIRAELPKR VEIETVFPDK IENFPWSGFV
GTKLVPKVIP IIHNSHSVLI FTNTRSQSEI WYRQLLDVAP EFAGLIALHH GSLDQKTRTW
VEDNLHAGKL KAVICTSSLD LGVDFSAVDT VVQVGSPKGV ARFMQRAGRS GHSPGALSKI
YFVPTNSLEI IEGAAMREAI KRNVVESRVP YVRSFDVLVQ YLVTLAVSDG FRPEIIYEEI
KKTFCYASVT PEEFAWALQF ITNGGNSLDA YDEFHKVIIE EGIYKVTSRA IATRHRLSMG
TIVSDSAMQV KYMSGKRLGS IEESFISKLK PGDVFWFSGN NLEIVHIHHM DVLVRKSKAK
KGMIPSWQGG RMPLSSQLAE MIRYKIDHFF DAGAIEEEEL NKLKELFDLQ AKRSHLPTNK
EFLIEYVQSR EGYHVFMYPF EGRFVHEGMA AIVSHKISEI QPITFSVAMN DYGFELLSDQ
EIPIEEALEL DLFNIDNLEK EIQLSVNATE MARRRFREIA SIAGLVFQGY PGKSAKTRHL
QANAELFFKV FEQYDSNNLL LRQAYDEVLD FQLEIRRMRK AYNRINEQKL VLVRPDKPTP
FAYPIMVDRM RGKFSNEKLE DRLFKMKTQL EKE
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