Gene CHU_3520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3520 
Symbol 
ID4183543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp4071537 
End bp4073831 
Gene Length2295 bp 
Protein Length764 aa 
Translation table11 
GC content38% 
IMG OID638073507 
ProductNa+/H+-exchanging protein (Na+/H+ antiporter) 
Protein accessionYP_680096 
Protein GI110639886 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0475] Kef-type K+ transport systems, membrane components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAT TTAAAAACGG CTTTTTTTAT ATTGGTATAA TCAGTGTGTT TTCGGTACTG 
ATGTATTGGA TCGTATTGAC AGGGGCATCG CTGGAGAAAG GCAGAAATAT TGTAATACCG
CAATCCGGTA AAAGTCAGTG GCAGGAATTT TTGGTAGCAA TGCAACATAA CCTGCAGCAT
CCGCTTGCAA TTATGCTGGC ACAGATCGTA ACAATTATTA TTATTGCACG CTTATTGGGC
TGGGTGTGCA AAAAGATCGG GCAGCCTTCC GTAGTCGGTG AAATTATAGC CGGCATCATC
TTGGGGCCAT CATTAATCGG CATGTATTTT CCGGAATTTT CAGCCGCCTT GTTTCCTGTA
AAATCATTGG GTAACCTTCA GTTTCTAAGC CAGATCGGCT TGATACTTTT TATGTTCATC
GTAGGCATGG AGCTGGATCT GAAAGTTTTG AGAAACAAGG CACATGAAGC AGTTGTTATA
AGTCACGCAA GTATTATTAT TCCGTTTGCT TTAGGCATGG GGCTCGCGTT TTTTATTTAT
CAGTCTTTTG CACCAGAAGG CGTACAGTTT TTATCGTTTG CTCTTTTTCT CGGTATTGCC
ATGAGTATAA CAGCCTTTCC GGTACTGGCG CGTATTGTTC AGGAGCGCGG CATCCATAAA
ACAAAATTAG GAACAGTTGT TATTACGTGT GCAGCAGCAG ATGATATTAC GGCATGGTGC
ATTCTTGCAG CTGTAATTGC AATTGTAAAA GCCGGTTCTT TTATAAGTGC CTTTTACATC
ATGGGACTTG CCTTGGGTTA TGTTGTTATT ATGATCTATG TGATCAAGCC ATTTTTAAAA
CGTGTGGGTG AACTGCATGC AACAAGAGAA AATTTAAGTA AACCAATTGT AGCCATATTC
TTACTTATAT TATTGATTTC TTCTTATGCT ACCGAAGTGA TTGGTATTCA CGCATTATTC
GGCGCATTTA TGGCAGGTGC TATCATGCCT GAAAACATTC GGTTCAGAAA TATTTTCATT
GAAAAAGTAG AAGACGTAGC ATTGGTTTTA TTGCTGCCCT TGTTTTTTGT TTTTACAGGA
TTAAGAACAC AGATCGGATT ACTGAATGAT CCGTATCTAT GGAAGATTAC CGGATTGATT
ATCCTTGTTG CGGTAGCCGG AAAATTTATT GGCAGTGCAC TGGCAGCAAA ATTTGTAGGA
CAGAACTGGA AAAACAGTTT AACCATCGGA GCACTTATGA ATACAAGAGG TTTGATGGAG
CTGGTTGTAT TAAACATTGG CTATGACTTA GGTGTTTTAA CTCCGGAAAT ATTTACCATG
ATGGTGATCA TGGCATTACT CACAACTGTT ATGACAGGGC CCGCGCTTGA CGCAATTAAT
TTTCTGTTCA GAAGTAAAGT GCAGATTGTA CCACAGGAAA TTAAAGACAT CAGCAAATAC
AAAATTTTAG TATCGTTCAG TAATCCGGAA TCGGGAAAGA CGTTATTAAA ACTTGCAAAC
GGTTTAACAA AAAAACTAAA CAGCAATGCA TCCTTAACGG CGCTGCACCT TTCGCCAACC
AATGAATTAC ATCATTATAA TATCGAAGAA TATGAAAAAG AAATCTTCGA TCCGATTATC
GAAGAATCAC AGCAGCTGAA CCAGAAAGTA ACAACCATAT TCAAAGCGTC TAACGATATT
AATTATGAGG TTGCAGATAC AGCAAACAAA GGAGATTACG ATCTGCTTTT AGTAGGCTTA
AGCGAATCTA TTTTTCAGGG AAGCTTGTTA GGGAAAGTAC TTGGCTTTAC AACCCGCATT
ATTAATCCTG AAAAATTATT AAATACCGTA ACAGGAAAAG AAAAATTGTT TGATAATTCG
CCGTTTGATG AAAGTACAAA ACTTATCTTA TCAAGAACAC ATGTACCAGT AGGAATTTTA
ATTGATAAGA ACCTGACAAA AGTTGATCGC ATTTTCATTC CGATCTTTGA TGTCAAAGAT
GCATACCTGG TTAATTATGC ACAGAAGCTT ATTCATAACA GCGGCGCGCA GGTAGTGGTG
CTGGATGCAG CCGGTGAAAT AAAAAACAAT TCTGAAACCA AAGAAAAAAT ACGTGCCATT
GAGCAAAATG CACCAAACCA CATTACGCTG CAAAATCAAC GTATAATTGA AAAAACATTT
TTACAGCAAC AGGACATGAT GATTATAAGT TTGGCCAGCT GGAAAAAATT AGTAGAAACA
AAAAGTGTAT GGTTATCAGA TATACCGTCC ACATTAATCA TTTCGGAAAA ACAACTTCAT
GGGAACCGTT CCTGA
 
Protein sequence
MKKFKNGFFY IGIISVFSVL MYWIVLTGAS LEKGRNIVIP QSGKSQWQEF LVAMQHNLQH 
PLAIMLAQIV TIIIIARLLG WVCKKIGQPS VVGEIIAGII LGPSLIGMYF PEFSAALFPV
KSLGNLQFLS QIGLILFMFI VGMELDLKVL RNKAHEAVVI SHASIIIPFA LGMGLAFFIY
QSFAPEGVQF LSFALFLGIA MSITAFPVLA RIVQERGIHK TKLGTVVITC AAADDITAWC
ILAAVIAIVK AGSFISAFYI MGLALGYVVI MIYVIKPFLK RVGELHATRE NLSKPIVAIF
LLILLISSYA TEVIGIHALF GAFMAGAIMP ENIRFRNIFI EKVEDVALVL LLPLFFVFTG
LRTQIGLLND PYLWKITGLI ILVAVAGKFI GSALAAKFVG QNWKNSLTIG ALMNTRGLME
LVVLNIGYDL GVLTPEIFTM MVIMALLTTV MTGPALDAIN FLFRSKVQIV PQEIKDISKY
KILVSFSNPE SGKTLLKLAN GLTKKLNSNA SLTALHLSPT NELHHYNIEE YEKEIFDPII
EESQQLNQKV TTIFKASNDI NYEVADTANK GDYDLLLVGL SESIFQGSLL GKVLGFTTRI
INPEKLLNTV TGKEKLFDNS PFDESTKLIL SRTHVPVGIL IDKNLTKVDR IFIPIFDVKD
AYLVNYAQKL IHNSGAQVVV LDAAGEIKNN SETKEKIRAI EQNAPNHITL QNQRIIEKTF
LQQQDMMIIS LASWKKLVET KSVWLSDIPS TLIISEKQLH GNRS