Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_3520 |
Symbol | |
ID | 4183543 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 4071537 |
End bp | 4073831 |
Gene Length | 2295 bp |
Protein Length | 764 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638073507 |
Product | Na+/H+-exchanging protein (Na+/H+ antiporter) |
Protein accession | YP_680096 |
Protein GI | 110639886 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0475] Kef-type K+ transport systems, membrane components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAT TTAAAAACGG CTTTTTTTAT ATTGGTATAA TCAGTGTGTT TTCGGTACTG ATGTATTGGA TCGTATTGAC AGGGGCATCG CTGGAGAAAG GCAGAAATAT TGTAATACCG CAATCCGGTA AAAGTCAGTG GCAGGAATTT TTGGTAGCAA TGCAACATAA CCTGCAGCAT CCGCTTGCAA TTATGCTGGC ACAGATCGTA ACAATTATTA TTATTGCACG CTTATTGGGC TGGGTGTGCA AAAAGATCGG GCAGCCTTCC GTAGTCGGTG AAATTATAGC CGGCATCATC TTGGGGCCAT CATTAATCGG CATGTATTTT CCGGAATTTT CAGCCGCCTT GTTTCCTGTA AAATCATTGG GTAACCTTCA GTTTCTAAGC CAGATCGGCT TGATACTTTT TATGTTCATC GTAGGCATGG AGCTGGATCT GAAAGTTTTG AGAAACAAGG CACATGAAGC AGTTGTTATA AGTCACGCAA GTATTATTAT TCCGTTTGCT TTAGGCATGG GGCTCGCGTT TTTTATTTAT CAGTCTTTTG CACCAGAAGG CGTACAGTTT TTATCGTTTG CTCTTTTTCT CGGTATTGCC ATGAGTATAA CAGCCTTTCC GGTACTGGCG CGTATTGTTC AGGAGCGCGG CATCCATAAA ACAAAATTAG GAACAGTTGT TATTACGTGT GCAGCAGCAG ATGATATTAC GGCATGGTGC ATTCTTGCAG CTGTAATTGC AATTGTAAAA GCCGGTTCTT TTATAAGTGC CTTTTACATC ATGGGACTTG CCTTGGGTTA TGTTGTTATT ATGATCTATG TGATCAAGCC ATTTTTAAAA CGTGTGGGTG AACTGCATGC AACAAGAGAA AATTTAAGTA AACCAATTGT AGCCATATTC TTACTTATAT TATTGATTTC TTCTTATGCT ACCGAAGTGA TTGGTATTCA CGCATTATTC GGCGCATTTA TGGCAGGTGC TATCATGCCT GAAAACATTC GGTTCAGAAA TATTTTCATT GAAAAAGTAG AAGACGTAGC ATTGGTTTTA TTGCTGCCCT TGTTTTTTGT TTTTACAGGA TTAAGAACAC AGATCGGATT ACTGAATGAT CCGTATCTAT GGAAGATTAC CGGATTGATT ATCCTTGTTG CGGTAGCCGG AAAATTTATT GGCAGTGCAC TGGCAGCAAA ATTTGTAGGA CAGAACTGGA AAAACAGTTT AACCATCGGA GCACTTATGA ATACAAGAGG TTTGATGGAG CTGGTTGTAT TAAACATTGG CTATGACTTA GGTGTTTTAA CTCCGGAAAT ATTTACCATG ATGGTGATCA TGGCATTACT CACAACTGTT ATGACAGGGC CCGCGCTTGA CGCAATTAAT TTTCTGTTCA GAAGTAAAGT GCAGATTGTA CCACAGGAAA TTAAAGACAT CAGCAAATAC AAAATTTTAG TATCGTTCAG TAATCCGGAA TCGGGAAAGA CGTTATTAAA ACTTGCAAAC GGTTTAACAA AAAAACTAAA CAGCAATGCA TCCTTAACGG CGCTGCACCT TTCGCCAACC AATGAATTAC ATCATTATAA TATCGAAGAA TATGAAAAAG AAATCTTCGA TCCGATTATC GAAGAATCAC AGCAGCTGAA CCAGAAAGTA ACAACCATAT TCAAAGCGTC TAACGATATT AATTATGAGG TTGCAGATAC AGCAAACAAA GGAGATTACG ATCTGCTTTT AGTAGGCTTA AGCGAATCTA TTTTTCAGGG AAGCTTGTTA GGGAAAGTAC TTGGCTTTAC AACCCGCATT ATTAATCCTG AAAAATTATT AAATACCGTA ACAGGAAAAG AAAAATTGTT TGATAATTCG CCGTTTGATG AAAGTACAAA ACTTATCTTA TCAAGAACAC ATGTACCAGT AGGAATTTTA ATTGATAAGA ACCTGACAAA AGTTGATCGC ATTTTCATTC CGATCTTTGA TGTCAAAGAT GCATACCTGG TTAATTATGC ACAGAAGCTT ATTCATAACA GCGGCGCGCA GGTAGTGGTG CTGGATGCAG CCGGTGAAAT AAAAAACAAT TCTGAAACCA AAGAAAAAAT ACGTGCCATT GAGCAAAATG CACCAAACCA CATTACGCTG CAAAATCAAC GTATAATTGA AAAAACATTT TTACAGCAAC AGGACATGAT GATTATAAGT TTGGCCAGCT GGAAAAAATT AGTAGAAACA AAAAGTGTAT GGTTATCAGA TATACCGTCC ACATTAATCA TTTCGGAAAA ACAACTTCAT GGGAACCGTT CCTGA
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Protein sequence | MKKFKNGFFY IGIISVFSVL MYWIVLTGAS LEKGRNIVIP QSGKSQWQEF LVAMQHNLQH PLAIMLAQIV TIIIIARLLG WVCKKIGQPS VVGEIIAGII LGPSLIGMYF PEFSAALFPV KSLGNLQFLS QIGLILFMFI VGMELDLKVL RNKAHEAVVI SHASIIIPFA LGMGLAFFIY QSFAPEGVQF LSFALFLGIA MSITAFPVLA RIVQERGIHK TKLGTVVITC AAADDITAWC ILAAVIAIVK AGSFISAFYI MGLALGYVVI MIYVIKPFLK RVGELHATRE NLSKPIVAIF LLILLISSYA TEVIGIHALF GAFMAGAIMP ENIRFRNIFI EKVEDVALVL LLPLFFVFTG LRTQIGLLND PYLWKITGLI ILVAVAGKFI GSALAAKFVG QNWKNSLTIG ALMNTRGLME LVVLNIGYDL GVLTPEIFTM MVIMALLTTV MTGPALDAIN FLFRSKVQIV PQEIKDISKY KILVSFSNPE SGKTLLKLAN GLTKKLNSNA SLTALHLSPT NELHHYNIEE YEKEIFDPII EESQQLNQKV TTIFKASNDI NYEVADTANK GDYDLLLVGL SESIFQGSLL GKVLGFTTRI INPEKLLNTV TGKEKLFDNS PFDESTKLIL SRTHVPVGIL IDKNLTKVDR IFIPIFDVKD AYLVNYAQKL IHNSGAQVVV LDAAGEIKNN SETKEKIRAI EQNAPNHITL QNQRIIEKTF LQQQDMMIIS LASWKKLVET KSVWLSDIPS TLIISEKQLH GNRS
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