Gene CHU_3504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3504 
Symbol 
ID4183898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp4056126 
End bp4057682 
Gene Length1557 bp 
Protein Length518 aa 
Translation table11 
GC content29% 
IMG OID638073491 
Producthypothetical protein 
Protein accessionYP_680080 
Protein GI110639870 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0130458 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGGA TACTGATACT TCTTTTTTCC TGTTTGCTTT TTACACAATG TGCCAATATT 
GTACCACCAA CCGGTGGGCC AAGAGATACA GAGGCACCAA AAATTATTTC TGCTTATCCT
AAAAACGGAC AGACTAATTA TAAAGAAAAC TTTATAACCA TGACCTTTGA TGAAGCTATT
GTAGACAATC AATTAAGCTC AAAGATTCTT GTGAGCCCTA CAATTGAAGG TTACTATACT
GTTAAGATCA AAAAAAATAC TGCTAAAGTA ATCTGGAGAG ATACCCTAAA AGAAAATACA
ACGTACAGTT TTAATATCAT TGACGGTATT AAAGATAATA CAGAAGGAAA TTTATTAAAG
AATTACAGCA TTACTTTTTC AACCGGTAAT GACATCGATT CCAACACAGT GAATTCAATT
ATAAAAAATA TACCAGGTGC TGCACTCAAT CCAAATTTAA AATTATTGCT CTTTGAAAAA
ACAGATTCAA TTACGAATAT ATTAAGTAAA AAACCAGAGT ACATAGGAAT AGCTACAGAT
TCAGGAAAAG TCGAAATAGG ATATATAAAA GAAAAAGAGT ACACAGCTGT AGCAGTGGCA
GATAATAATA AAAATAATAA ATGGGATAAA AATGAACCTT TATCTGTAAA AAATATCATC
GTAAAAGATA AGATAACAGA ATCTTTTCAG ATTCAGGAAA CAATACTTGA TACAGCTAAA
GTACTTTCGG CAAATTCAGT AAATAAAACT ATTAACATAT TCTTTAGTAA AGGTTTACAG
TATTTAAAAA TAAAAGGTGA AGAAGGTGAA TATATATATA CAAAACTCTC AAGCAGAAAA
TACAGCATCG AAAATCAATA CAATTTAACA GATACTACTA AAATACAAAT TGAATATATT
GATTCTGTGG GGATAAAAAG TGAATATGTA AAGAAAGTAA AATTCAAACA AATTGATTTA
CAAAAAGATA AAGACAGTAT TATAAACATT TCAACTATCA ACAAAAAGAA AAGTTTGAAG
CAGGTTATTG ATTCAATTCA ATTTAGTACA GACAAATTGA TTACTAAAAT TGATGTAGAG
GTTATAGCAC CAAAAAATGT AACTTATACA TTGACAAATA ATTATAATAA TTTTGTTCTT
GTTTTAAAAG GTCAAAAGGA AAAGGATACT GTAGAAGTAG TTATTCCACG TGAAAGTGCA
ACTTCAATAT ATGGGGAATA TAACAGAAAC TATAAAGAAA AGTTTGGTAC AGATAATGAA
AAGAATTACG GAAATATTCA ATTCGAATTA AAAACAAATC AGACAGGGTT TACCACGTAT
TTTAAAAATA GCAAAGATGA AATTGTTTAT ACTTCAACAG ACAAACATAA AAATCAAATA
AAAAACTTAG AACCAGGCGA GTATATATTA TTTGTACATA TTGATACAAA CAAAGACGGA
TATTGGAATG CATACGATCC AATCAGCAAT ACACCAGCTG AACCGATCTA TTATTTTAAA
GAAAAACTGG TAATACGGGC AAACTGGGAT TTAGAAGATA TACAAATGAT ATTTTAA
 
Protein sequence
MIRILILLFS CLLFTQCANI VPPTGGPRDT EAPKIISAYP KNGQTNYKEN FITMTFDEAI 
VDNQLSSKIL VSPTIEGYYT VKIKKNTAKV IWRDTLKENT TYSFNIIDGI KDNTEGNLLK
NYSITFSTGN DIDSNTVNSI IKNIPGAALN PNLKLLLFEK TDSITNILSK KPEYIGIATD
SGKVEIGYIK EKEYTAVAVA DNNKNNKWDK NEPLSVKNII VKDKITESFQ IQETILDTAK
VLSANSVNKT INIFFSKGLQ YLKIKGEEGE YIYTKLSSRK YSIENQYNLT DTTKIQIEYI
DSVGIKSEYV KKVKFKQIDL QKDKDSIINI STINKKKSLK QVIDSIQFST DKLITKIDVE
VIAPKNVTYT LTNNYNNFVL VLKGQKEKDT VEVVIPRESA TSIYGEYNRN YKEKFGTDNE
KNYGNIQFEL KTNQTGFTTY FKNSKDEIVY TSTDKHKNQI KNLEPGEYIL FVHIDTNKDG
YWNAYDPISN TPAEPIYYFK EKLVIRANWD LEDIQMIF