Gene CHU_3497 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3497 
Symbol 
ID4183891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp4045534 
End bp4046298 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content40% 
IMG OID638073484 
Productexodeoxyribonuclease III 
Protein accessionYP_680073 
Protein GI110639863 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.570342 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTA TCACCTATAA TGTAAATGGT ATTCGTGCTG CAATTACAAA AGGCTTATTA 
ACCTGGGTTA AAGCAACCAA TGCAGACGTA CTGTGTTTTC AGGAAATCAA AGCATCTGTA
GATCAATTTG ATGTAGAAAG TTTTAAAGCC CTGGGTTACA CTACCTACGC GTTTCCGGCA
CAGAAAAAAG GCTACAGCGG TGTGGCAATC TGTACAAAAG AAATTCCTGT GCATGTTGAA
TATGGCTGCG GCATTGAAAA ATACGACTTC GAAGGCCGTG TGATCCGTGC TGATTATCCA
ACATTTTCGG TAATGAATGT GTATATGCCG TCAGGCTCCA GCGGCGATGA CCGTCAGGCA
TTTAAGTTTG GATGGATGGA TGATTTCCTG CTTTATATTT CAGAAGTAAG AAAAAAAATT
CCTAACTTAA TTGTGTGCGG AGATTATAAC ATCTGCCATA AAGCGATTGA TATTCATAAT
CCAAAATCAA ACGCCAAGAC GTCGGGTTTT TTACCTGAAG AGCGCGAATG GATGAGTAAA
TTCTTTGACT CCGGTTTTGT TGATGCATTC AGGCATTTTA ATGAAGAGCC GCACCACTAT
ACCTGGTGGA GTTACCGGGC CGGATCAAGA GGTAAAAATC TGGGTTGGCG AATTGATTAT
CATTCAGTAA CACAGGAAAT GGTTGGGAAA TTAAAGCGTT CCGTAATTTT ACCGGATGCC
ATACATTCTG ACCATTGTCC TGTTTTATTA GAAATTATTC CCTAA
 
Protein sequence
MKIITYNVNG IRAAITKGLL TWVKATNADV LCFQEIKASV DQFDVESFKA LGYTTYAFPA 
QKKGYSGVAI CTKEIPVHVE YGCGIEKYDF EGRVIRADYP TFSVMNVYMP SGSSGDDRQA
FKFGWMDDFL LYISEVRKKI PNLIVCGDYN ICHKAIDIHN PKSNAKTSGF LPEEREWMSK
FFDSGFVDAF RHFNEEPHHY TWWSYRAGSR GKNLGWRIDY HSVTQEMVGK LKRSVILPDA
IHSDHCPVLL EIIP