| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_3487 |
|---|
| Symbol | |
|---|
| ID | 4184906 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | + |
|---|
| Start bp | 4033601 |
|---|
| End bp | 4034689 |
|---|
| Gene Length | 1089 bp |
|---|
| Protein Length | 362 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 638073474 |
|---|
| Product | NADH:flavin oxidoreductase family protein |
|---|
| Protein accession | YP_680063 |
|---|
| Protein GI | 110639853 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.587837 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACAT CTAACCTATT TGAACCCTTG AAAATTGGTT CTATCTCTTT AAAGAACAGC
ATTGTAATGG CGCCGATGAC GCGTTGCAGA GCTATAGGCA ATATTCCCAA CGACTTGATG
GCAACCTATT ATGGTCAGCG TGCAACCGCA GGGCTTATTA TTACCGAAGG AGCGTCTCCT
TCACCAAACG GTTTGGGTTA TGCGCGCATA CCGGGTATTT TCAACAAAGA GCAGGTTGAA
GGCTGGAAAA AAATAACTAC GGCGGTACAT GATAAAGGCG GTAAAATTGT AATACAGCTG
ATGCATACCG GCCGTATCAG TCACCCGGCT AATATGCCTG AAGGCGCAAG CATTTTATCG
GCATCTTCGG TAAAGCCTGG CGGACAAATG TGGACTGACT CGTTACAGAT GCAGGATTAT
CCGATTCCAA AAACCATGAC GGTAGAAGAA ATTTTACAGA CCAAAGAAGA ATTTGTAACG
GCTGCTAAAA ACGCGATCGA AGCAGGTTTT GATGGTGTTG AATTGCACGG TGCGAACGGT
TATTTACTGG AACAGTTTAT CTCTCCGCAT ACCAACATGC GCGGCGATGA GTACGGCGGC
GGTATTGACA GACGGTGTAA ATTTGTGCTG GATGTTGTTG AAGCGGTTGC AGCAGCAATC
GGCAAAGACA AAACAGGTAT CCGGCTTTCT CCATATGGCG TTGCCAGTGA TATGCCTCCG
TATCCGGATA TTGAAGTAAC ATATGAATAC CTGGCCCTAG CATTAAACGA TTTAGGTATT
GACTATATCC ACGTGGTAGA TCATTCCGCG ATAGGTGCGC CTGCAGTGCC GTTAAGTATC
AAAGAAAAAA TCCGTGCCGG GTTTAGCAAT ACCATTATTC TTTGCGGCGG CTTTGATCAG
GCTGCTGCTG AAAGAGCAAT AGACACCGGA CTTACAAATG CCGTGGCTTT TGGACGACCG
TTTATAAACA ATCCCGATCT GGTTGAACGT TTAAAAAATA ATCAGCCATT GTCTGATAAA
CTGAATACAG ATGCATTCTA TTCAGCAGAT GAAAAAGGAT ACACGGATTA TCCGGTGTTT
GGTGGTTAA
|
|---|
| Protein sequence | MKTSNLFEPL KIGSISLKNS IVMAPMTRCR AIGNIPNDLM ATYYGQRATA GLIITEGASP
SPNGLGYARI PGIFNKEQVE GWKKITTAVH DKGGKIVIQL MHTGRISHPA NMPEGASILS
ASSVKPGGQM WTDSLQMQDY PIPKTMTVEE ILQTKEEFVT AAKNAIEAGF DGVELHGANG
YLLEQFISPH TNMRGDEYGG GIDRRCKFVL DVVEAVAAAI GKDKTGIRLS PYGVASDMPP
YPDIEVTYEY LALALNDLGI DYIHVVDHSA IGAPAVPLSI KEKIRAGFSN TIILCGGFDQ
AAAERAIDTG LTNAVAFGRP FINNPDLVER LKNNQPLSDK LNTDAFYSAD EKGYTDYPVF
GG
|
|---|
| |