Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_3485 |
Symbol | iscS |
ID | 4184904 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 4031667 |
End bp | 4032794 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638073472 |
Product | cysteine desulfurase |
Protein accession | YP_680061 |
Protein GI | 110639851 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0611643 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTGTTT ACTTAGATAA TGCTGCAACC ACGGCTTTAG ATCCTTTGGT TCTGGAAGCC ATGATGCCTT ATTTAACGGA CCACTTTGGA AACGCATCTT CTATCCACGG GCACGGCCGC GAAACGCGGT CGGCTATTGA GATCGCGCGT AAAAAAATTG CCGATCTGCT GAACACTACC GCTGCTGAAA TCTTTTTTAC TTCCGGCGGT ACCGAAGCAG ATAATACGGC AATCATTGGC GCGGTTGAAA AACACAACAT CAAACACATT ATCACCAGCC GGCTGGAACA CCATGCCGTA CTGCATACAG CCCAGTATCT GGAAAAGCTG CATCGGGTCT CTGTGTATTA TGTAGACGTA AATGAAAAAG GTGTTATTGA TCTGGCACAT CTGGAATCAC TGCTGCAGCA ATACCCGAAT GCATTGGTAA GTTTAATGCA TGGTAATAAT GAGATCGGAA ATATCCTGGA TCTGAAAAAA GCCGGCGATC TTTGTCACCA GTATAAAGCA CTCTTTCACA GTGATACGGT GCAGACCATT GGTCATTATC CTTTGCATTT ATATTCTTTA CCGGTTGATT TCATTGCAGG CTCCGCACAC AAATTCCACG GACCCAAGGG AATTGGCCTG TTATATCTGA AGTCCGGTTC TGCTATTTAT CCTTATATGC ACGGCGGTGC ACAGGAACGT AACATGCGTG GCGGTACTGA AAATACTCCA GCCATTGTAG GTATGGCGAA AGCGTTGGAA CTTGCCTATC AACGTATGGA AGCTGACCGC AACCACATTA CCGGGTTGAA AAAACACATG ATTGAAGAAC TCAATAAAAT TCCCGGCTTA TTATTTAATG GCGAATCTGC TGATATAGAT AAAAGCCTGA TGCATGTATT GAACGTCAGT TTGCCTCCAT CAGAAAATAA TGAAATGCTG GTGATGAATT TAGACATTGC GAAAATTTCA GCCTCTGCCG GCAGTGCCTG TACAAGTGGC ACAAATATTG GTTCTCATGT ATTAGAAGCT ATTGGCGCTA AAGACGATTG GGGCTATGTG CGTTTTTCTT TTGGAAGAAA TAATACAAAA GAAGAAATAG ATTACTGCAT CAAAACGTTA GTAAAAAGTA TCAAGTAA
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Protein sequence | MRVYLDNAAT TALDPLVLEA MMPYLTDHFG NASSIHGHGR ETRSAIEIAR KKIADLLNTT AAEIFFTSGG TEADNTAIIG AVEKHNIKHI ITSRLEHHAV LHTAQYLEKL HRVSVYYVDV NEKGVIDLAH LESLLQQYPN ALVSLMHGNN EIGNILDLKK AGDLCHQYKA LFHSDTVQTI GHYPLHLYSL PVDFIAGSAH KFHGPKGIGL LYLKSGSAIY PYMHGGAQER NMRGGTENTP AIVGMAKALE LAYQRMEADR NHITGLKKHM IEELNKIPGL LFNGESADID KSLMHVLNVS LPPSENNEML VMNLDIAKIS ASAGSACTSG TNIGSHVLEA IGAKDDWGYV RFSFGRNNTK EEIDYCIKTL VKSIK
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