Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_3481 |
Symbol | |
ID | 4184901 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 4028444 |
End bp | 4029265 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638073469 |
Product | permease |
Protein accession | YP_680058 |
Protein GI | 110639848 |
COG category | [R] General function prediction only |
COG ID | [COG2962] Predicted permeases |
TIGRFAM ID | [TIGR00688] rarD protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 48 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0516361 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCAACAG GTATCCGTTA CATGCTTCTC TCGATCGTAT CGTTTTCTCT CATGCATTTA TGCGTGAAAG CGATCCCGGA CATTCCTGTT GTACAAACGA TTTTTCTAAG ATCCGTTTTC TCAATCGTAT TTTGTTGTAT CGCGATTAAA CAAGCTAAGG TTTCTGTTTG GGGAAATAAT AAAACATTTC TCGTCTTGCG TGGTTTGGTC GGCATGCTTT CCCTCATCTG TTTTTTCTAT TCCATACAAA TGCTTCCCTT GGGAACAGCT GTAACCATCG GCAATCTGGT TCCTTTCTTT ACGTTATTTC TGGCCTTCGT TTTTCTGAAA GAAAAAATAC CGCACATAAA ATGGCTGTTC TTCGCTGTTT CCTTTGTGGG TGTTTTGCTG ATGAAAGGCC TTGATGATGA ACTCCCGGCA TTGGGAATTA TATTAGGTTT ATGCGCAGCT TTCTTTACAG CAACCGCGCA CTTTGTAGTC CGCAAACTGC GCGACACCGA CGACACATCG GTGATCATGT TTTACTTTCC ATTCATTACT ATTCCATTCA TGTTGCCTTT TGCAATTCTG CAATGGGAAA CACCAGATGC ACGGGAATGG TTGTTTTTAG TTTTGATCGG AATCACTACA CACGTTGGCC AACTCTTTCT GACAAAAGCC TATAAACACG AAGAAGTTAA AAATATTTCG TATGTATACT ATCTGGGCAT CATACTTTCC TTTGTCTATG GAGTTTCTTT TTTCGGAGAG TTCATCAGTG TCAAATCCTC CGTTGGTGTG GGGTTGGTGA TTTTGGGAAT GGTATTGAAT ATGTTGGGGT AG
|
Protein sequence | MSTGIRYMLL SIVSFSLMHL CVKAIPDIPV VQTIFLRSVF SIVFCCIAIK QAKVSVWGNN KTFLVLRGLV GMLSLICFFY SIQMLPLGTA VTIGNLVPFF TLFLAFVFLK EKIPHIKWLF FAVSFVGVLL MKGLDDELPA LGIILGLCAA FFTATAHFVV RKLRDTDDTS VIMFYFPFIT IPFMLPFAIL QWETPDAREW LFLVLIGITT HVGQLFLTKA YKHEEVKNIS YVYYLGIILS FVYGVSFFGE FISVKSSVGV GLVILGMVLN MLG
|
| |