Gene CHU_3475 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3475 
Symbol 
ID4184895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp4021291 
End bp4021968 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content40% 
IMG OID638073463 
Producthypothetical protein 
Protein accessionYP_680052 
Protein GI110639842 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.172021 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.106248 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGAA TTATACTTCT TGCTTTTTGT TTGGTATCCG TGTTTGCGCA TGCGCAAAAA 
GGTGAAACAA TAAAATGGTC CTTTGCTTTA TCGTCCAAGG AAATACATAT TGGTGATACC
GTTGAAATTG TTGCTACGGC TGAAATTATA CCCGACTGGT ATCTGTATTC CAATGACTTT
GATCCTACGC TGGGTCCCAC GGTAACCACG TTTGATTTTG TTTCAGACAA AGGATATTCC
TTATTAGGAA AAACGAAAGC GATCAAACCT AAGAAAAAGT TTGATCCTAT TTGGGAAGGA
GAAGTTACCT ATTTCACAGG TCATGCAGAG TTCAGACAAA AAATTGTCGT TCAGAATAAC
GCACCCAAAA TTGTGTTAAT GGTTGAATAT CAAACCTGCA GTGATGCGGC GGGCCGCTGT
ATTCCCGGTG AAGCAGAATT TGAATTTATG GGGCTGACCG TGCTGCCTGC AAAAAAAGTA
ACAAAGACTT CTGCCGTTGA ACCAACAACA GAACCTTCTT CAGCAAAAAA TCCGGAACAG
GTTAATACCA ATACCAATAA ACCGGAAACC ATTCAACGTT TAGAAGCTGA AAAAGCCAGG
TTAACACAAC GGGACGGGGC AGGGAATGAT GTAAGTGTTG ACTATTTGAA AAGTTTCGTT
AAAAAGTACA GTAAATAA
 
Protein sequence
MKRIILLAFC LVSVFAHAQK GETIKWSFAL SSKEIHIGDT VEIVATAEII PDWYLYSNDF 
DPTLGPTVTT FDFVSDKGYS LLGKTKAIKP KKKFDPIWEG EVTYFTGHAE FRQKIVVQNN
APKIVLMVEY QTCSDAAGRC IPGEAEFEFM GLTVLPAKKV TKTSAVEPTT EPSSAKNPEQ
VNTNTNKPET IQRLEAEKAR LTQRDGAGND VSVDYLKSFV KKYSK