Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_3475 |
Symbol | |
ID | 4184895 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 4021291 |
End bp | 4021968 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638073463 |
Product | hypothetical protein |
Protein accession | YP_680052 |
Protein GI | 110639842 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.172021 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.106248 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGAA TTATACTTCT TGCTTTTTGT TTGGTATCCG TGTTTGCGCA TGCGCAAAAA GGTGAAACAA TAAAATGGTC CTTTGCTTTA TCGTCCAAGG AAATACATAT TGGTGATACC GTTGAAATTG TTGCTACGGC TGAAATTATA CCCGACTGGT ATCTGTATTC CAATGACTTT GATCCTACGC TGGGTCCCAC GGTAACCACG TTTGATTTTG TTTCAGACAA AGGATATTCC TTATTAGGAA AAACGAAAGC GATCAAACCT AAGAAAAAGT TTGATCCTAT TTGGGAAGGA GAAGTTACCT ATTTCACAGG TCATGCAGAG TTCAGACAAA AAATTGTCGT TCAGAATAAC GCACCCAAAA TTGTGTTAAT GGTTGAATAT CAAACCTGCA GTGATGCGGC GGGCCGCTGT ATTCCCGGTG AAGCAGAATT TGAATTTATG GGGCTGACCG TGCTGCCTGC AAAAAAAGTA ACAAAGACTT CTGCCGTTGA ACCAACAACA GAACCTTCTT CAGCAAAAAA TCCGGAACAG GTTAATACCA ATACCAATAA ACCGGAAACC ATTCAACGTT TAGAAGCTGA AAAAGCCAGG TTAACACAAC GGGACGGGGC AGGGAATGAT GTAAGTGTTG ACTATTTGAA AAGTTTCGTT AAAAAGTACA GTAAATAA
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Protein sequence | MKRIILLAFC LVSVFAHAQK GETIKWSFAL SSKEIHIGDT VEIVATAEII PDWYLYSNDF DPTLGPTVTT FDFVSDKGYS LLGKTKAIKP KKKFDPIWEG EVTYFTGHAE FRQKIVVQNN APKIVLMVEY QTCSDAAGRC IPGEAEFEFM GLTVLPAKKV TKTSAVEPTT EPSSAKNPEQ VNTNTNKPET IQRLEAEKAR LTQRDGAGND VSVDYLKSFV KKYSK
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