| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_3474 |
|---|
| Symbol | dsbD |
|---|
| ID | 4184894 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | - |
|---|
| Start bp | 4019615 |
|---|
| End bp | 4021291 |
|---|
| Gene Length | 1677 bp |
|---|
| Protein Length | 558 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 638073462 |
|---|
| Product | thiol:disulfide interchange protein |
|---|
| Protein accession | YP_680051 |
|---|
| Protein GI | 110639841 |
|---|
| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG4232] Thiol:disulfide interchange protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.149531 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.120308 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTAT CTATTGTTTT TCTTTTTGCC TTTTTGTTTC TAACCGTTCA GGTACAGGCA
GGTAAAAATG TTTCTATTCC TGAGACTGAA TTACAAAAGC TGGCGCAGCA TGTTGACAAT
CTTGTTAAAA GAGATAGTGT GAACGAAGCG ATTATTAAAC TGCTAAAAGA TAGTTTAGAC
GGGAAAGGCC ACACAGTTGC AAAAGCGCAG ACACCAAAAG TGTCTACTGT AAAAATCACT
GTTAAAGAAC GTGGCGGAAT TACACAGGAT ACTTCTTTAT TCTTATTTGC GATCTTTGCT
TTTGCTGCAG GTTTTGTGTC CATCATTACA CCTTGTGTAT TTCCCATGGT ACCGATGACC
GTTTCATTTT TTACAAATAC ATCAAGTTCC AAAAAAGAAT CTGTCCGCAA AGCAATCATT
TATGGCTTGT CTATTGTAAC AATCTACACG CTGATCGGTG TTGTAATTGC GAAGATCAAT
GGTCCGGAGT TTGCAAACTT CTTAAGCACA CACTGGTTCC CGAATGTTTT GTTCACGTTG
ATCTTCCTTG TTTTTGCGCT TTCATTCTTT GGCTTATTTG AAATTACGCT TCCGAATAAT
TTTATCAATA AGGTTGACAA ACAATCCGAT AAAGGCGGCT ATGTTGGAAT TTTCTTTATG
GCATTTACGA TCGTACTGGT TTCATTTTCA TGCACCGGCC CGATTGTGAG TACGATCTTA
TTATCGGCAG CTGGTGGTGA AATTGTAAAA CCAATCATCG GGATGGTTGC CTATTCATCG
GCTTTTGCCT TACCGTTTAC ATTATTTGCC TTATTTCCCA ACTGGTTAAA ATCATTGCCT
AAATCAGGCG GCTGGTTAAA CACCGTTAAA GTAAGTTTAG GATTTATTGA ACTCGCGTTG
GCATTAAAGT TCCTAAGTAT TGCAGATCAG GTGATGCACT GGAATATTCT GAACAGAAAC
ACATTTTTGC TGATCTGGAT TCTGATTTTC TTCTCATTAG GTTTATACCT GCTTGGTGTT
ATTAAGTTCA GTGAACACGA TAAAGGCAGC ATCGGCTGGC CAAGAAGAAG CCTTGCGATA
TTAAGCATTT TGTTTGCCGG ATATTTAGGA ACCGGTATTG CCGGTAGCCC ACTGAAAAAA
CTTTCGGGCT ATTTGCCACC GCTGGAAGAT TATACTACCG CAACCGACAG GATTTGCGGT
ACACCAAAGT ATGCTGATTT TCTGCATTTA CCGCTCGGCC TTCAGGGGTA TTTTGATTAC
AAAGAGGCCC TTGCGTGTGC GAAGCAGCAG GGAAAACCCT TATTCATTGA TTTCACCGGA
CATGGTTGTG TAAACTGCAG AGAAATGGAA CGCAATGTTT GGGCAGATCC TGCGGTGCTA
AAGCACTTGA ATGAAGACTT TGTTATGGTA GCGTTGTATG TAGATGACCG CACAGAACTA
CCTGAAAACG AATGGTACAC GTCTAAAAAG GATGGGAAAG TAAAAAAATC CATCGGTAAA
CAGAATCACG ATTTCCAGAA TACCCGGTTT AATTTTCTTG CCCAGCCCTT TTATGTAATC
CTGGATCCGA ATACAGAAAT GGAACTGGCG CAGCCAATTA CATACGAACC AAGCATTGAA
GCGTACATTG ATTTTCTGGA AGAAGGAAAA GCAAATTATA AAAAGCTATA TAAATAA
|
|---|
| Protein sequence | MKVSIVFLFA FLFLTVQVQA GKNVSIPETE LQKLAQHVDN LVKRDSVNEA IIKLLKDSLD
GKGHTVAKAQ TPKVSTVKIT VKERGGITQD TSLFLFAIFA FAAGFVSIIT PCVFPMVPMT
VSFFTNTSSS KKESVRKAII YGLSIVTIYT LIGVVIAKIN GPEFANFLST HWFPNVLFTL
IFLVFALSFF GLFEITLPNN FINKVDKQSD KGGYVGIFFM AFTIVLVSFS CTGPIVSTIL
LSAAGGEIVK PIIGMVAYSS AFALPFTLFA LFPNWLKSLP KSGGWLNTVK VSLGFIELAL
ALKFLSIADQ VMHWNILNRN TFLLIWILIF FSLGLYLLGV IKFSEHDKGS IGWPRRSLAI
LSILFAGYLG TGIAGSPLKK LSGYLPPLED YTTATDRICG TPKYADFLHL PLGLQGYFDY
KEALACAKQQ GKPLFIDFTG HGCVNCREME RNVWADPAVL KHLNEDFVMV ALYVDDRTEL
PENEWYTSKK DGKVKKSIGK QNHDFQNTRF NFLAQPFYVI LDPNTEMELA QPITYEPSIE
AYIDFLEEGK ANYKKLYK
|
|---|
| |