| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_3469 |
|---|
| Symbol | gltB |
|---|
| ID | 4186047 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | - |
|---|
| Start bp | 4014365 |
|---|
| End bp | 4015954 |
|---|
| Gene Length | 1590 bp |
|---|
| Protein Length | 529 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 638073457 |
|---|
| Product | glutamate synthase, large subunit |
|---|
| Protein accession | YP_680046 |
|---|
| Protein GI | 110639836 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0069] Glutamate synthase domain 2 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.185873 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGATAAAT TAGATATGAA AGAAGTAGTA GAAGTGATCG GTAGCATTCC CTGGTGGGCA
TACATTTTTT TGTTTATTGG AGTTATTGCC ATCAAAGATA TATTCTTCAA CAGGCGGCAT
ACGATAAAAC ACAACTTCCC GATTGTTGGC CATTTCAGGT ATCTGCTTGA AAAGATTGGT
CCGGAATTGA GACAATATAT TGTTGCTAAT AACAGAGAAG AGCTTCCTTT TAACCGCAGA
CAACGGTCGT GGATTTATGC GTCTTCCAAA CAGGAAAATA ACTATCAGGG TTTTGGTACG
GATCAGGATC AGAACAGCCC GGGTTTTGTT TTTATAAAAC CATCTATGTT TTCATATGCA
GTTAAAGAAG GGCATCCGAA TAAAAAGAAA CCGGATTTTG TACCGTGTGC AAAAATCATG
GGCGCATATA ATAAACGCAG ACGTCCCTAC AGACCGTATT CGATTATCAA TATTTCAGGA
ATGAGCTACG GCTCACTTTC TGCACGGGCG GTAGAGTCAT TAAATAAAGG TGCATTAAAA
GCAGGTTGTT ATCAGAATAC CGGAGAAGGT TCGTTAGCTC CGCATCATAA ACATGGTGCT
GATATCATGT TCCACTTTGG TACAGGATAC TTTGGTGTGC GCGATGAACA TGGTAATTTT
TCCATGTCAA AACTGAAGGC ATTGGTTGAA GCCAATCCAT GTATCCGTGC AATAGATTTA
AAATTATCCC AGGGAGCAAA ACCCGGCAAA GGGGGTGTAT TGCCTGCTTC AAAAATCACG
CAGGAGATTG CGGATATCAG AGGTTTGCCA ATGGGTAAAG ATGTAATTTC ACCGGCCTAC
CACAGCGTGT TTTCAAATGT GCCGGAAATG ATGGATTTTA TTGAAAACAT TGCACAGGAA
ACCGGCTTAC CCGTAGGATT TAAATCTGCG GTTGGTAAGA TGGAAATGTG GGTGGAACTG
GCAGACCGTA TGTTAGAGAA AGGGTATGGT CCGGATTTTA TCACGATTGA TGGTGGTGAA
GGCGGTACCG GTGCCGCGCC GCCAGCTTTT GCTGATCACG TTTCTTTACC GTTTGTATAT
GCGTTCAGTA ATGTATACAA AATATTTGCG GAAAGAGGTT TAACGGATCG TATTGTGTTT
GCTGCATCCG GCAAGCTGGG TTTCCCGGAA AGTTCGCTGA TGGCATTCGC GTTAGGCGCT
GATGTAATCC ATGTGGCACG TGAGGCAATG ATGTCGATCG GGTGCATTCA GGCACAGGTT
TGTCATAACA ATACCTGTCC GTCTGGAGTT GCTACGCAGA ATAAATGGCT GCAATCGGGT
ATTGATGTAC CGTTAAAAGC AGATCGTTTG TATAATTACA TTAAGAATTT ACGTAAAGAA
GTACTGGAAA TTACGCATGC CTGCGGATAT GAACATCCGT CGCAAATGAC CATGACGGAT
ATTGATATCA GTATGGGAGA TAATAACCTA ACCATGCCGC TGGTTGATGC GTATAAGTAC
AACAAAATTC CGGTAAATTT TGAGTCTATG CAGAAATTGG CAGACTGCAA GTATTTAGGC
AAAGCAAATC CGGAAATTAT TTTTAAATAA
|
|---|
| Protein sequence | MDKLDMKEVV EVIGSIPWWA YIFLFIGVIA IKDIFFNRRH TIKHNFPIVG HFRYLLEKIG
PELRQYIVAN NREELPFNRR QRSWIYASSK QENNYQGFGT DQDQNSPGFV FIKPSMFSYA
VKEGHPNKKK PDFVPCAKIM GAYNKRRRPY RPYSIINISG MSYGSLSARA VESLNKGALK
AGCYQNTGEG SLAPHHKHGA DIMFHFGTGY FGVRDEHGNF SMSKLKALVE ANPCIRAIDL
KLSQGAKPGK GGVLPASKIT QEIADIRGLP MGKDVISPAY HSVFSNVPEM MDFIENIAQE
TGLPVGFKSA VGKMEMWVEL ADRMLEKGYG PDFITIDGGE GGTGAAPPAF ADHVSLPFVY
AFSNVYKIFA ERGLTDRIVF AASGKLGFPE SSLMAFALGA DVIHVAREAM MSIGCIQAQV
CHNNTCPSGV ATQNKWLQSG IDVPLKADRL YNYIKNLRKE VLEITHACGY EHPSQMTMTD
IDISMGDNNL TMPLVDAYKY NKIPVNFESM QKLADCKYLG KANPEIIFK
|
|---|
| |