| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_3460 |
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| Symbol | |
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| ID | 4186038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 4005124 |
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| End bp | 4005855 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 638073448 |
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| Product | proteasome-type protease |
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| Protein accession | YP_680037 |
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| Protein GI | 110639827 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3484] Predicted proteasome-type protease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0153952 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACGTATT GTTTAGGTGT AAAATTAAAG GATGGCTTGG TTGCCATTGC TGATACACGA
ATAACCTCTG GAACAGATAC CACAACAGCT AAAAAATTAT TTGTACATGA AAGCGCACAC
GGAAGTCTGT TTCTGATGAC AAGCGGCCTG CGATCTGTTC GTGATAAAGC AATAACCTAT
TTTAAAGAAG TTTTAAAAGA CGAACATGTT GTTTACAATC AATTATATGA AGCCGTTAAT
GCATTTGGCA ATCAACTGAG ACGTGTAGCA GAAGAAGACC GGAAGGCCTT ATATGCGGCA
GGTTTCGCAT TCAATTTACA TACCATTGTA GGCGGACAAT TAAAGAATGA TGAAGAGCCT
AAAATGTTTT TACTGTATCC GGAAGGTAAC TGGATCGAAC TGACGCAGAC ATCTCCTTTC
ATGATCATTG GTAACAGTGG TTATGGCAAG CCTATTTTAA ACAGAACCGT AAAGTATGAA
TCTACACTGG AAGAGGTTTT AAAAGCCGGA TTTTTATCGT TTGACTCTAC ACGCGTTTCC
GCAAACGATG TTGATTTTCC GTTAGATGTA GTTGTGTATT ACAACAACTC ATTTAAAATG
ATCGAACATA GGTTTGAGAA AAAAGACATG GAAATAATTT CTACAACCTG GGATAATCAA
TTGAAGCAGG CATTGGATAG TGTTCCTGAA GAGTGGATGA ATGTGGTATT TGACCGTAAA
AATGTTCTTT AA
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| Protein sequence | MTYCLGVKLK DGLVAIADTR ITSGTDTTTA KKLFVHESAH GSLFLMTSGL RSVRDKAITY
FKEVLKDEHV VYNQLYEAVN AFGNQLRRVA EEDRKALYAA GFAFNLHTIV GGQLKNDEEP
KMFLLYPEGN WIELTQTSPF MIIGNSGYGK PILNRTVKYE STLEEVLKAG FLSFDSTRVS
ANDVDFPLDV VVYYNNSFKM IEHRFEKKDM EIISTTWDNQ LKQALDSVPE EWMNVVFDRK
NVL
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