Gene CHU_3457 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3457 
Symbol 
ID4186035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp4001193 
End bp4002101 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content40% 
IMG OID638073445 
Productb-glycosyltransferase 
Protein accessionYP_680034 
Protein GI110639824 
COG category[R] General function prediction only 
COG ID[COG1216] Predicted glycosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0284988 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCAA TCCAGGCATC TGTAATTATT CCTTCGTTTA ATGGAAAAGA TAAAGTGATC 
GGATTACTTA AATCAATAGA AAAGCAAACC GTTACTAACG TTGAAGTGCT TGTTGTTATT
GACGGTTCAA CAGATGGCTC CGCTGATGCC TTAAGATCGA CAGACTGGAA ATTACAGTTG
CGGCTCATTG AACAGGAAAA TAAAGGAAGA GCCGGAGCAC GCAATACCGG TGCCGGGGAG
GCACAATCAG AGTTGCTGAT TTTTTTTGAT GATGACCTGA TGCTTGATCC GGCGTGCATT
GAAAAGCATA TTTCGGCAAA CGATTTATCT GTAAAACGCA TCGTAATGGG CCAGGTGATC
GAGCCCAGCA ATGCGGCGGA TACTGAAATA AAAAAATACA AAGACTATCT CAATGAAAGC
TGGGCAACGG TGTTAGATCC GTATAAGCAG AAAAATTTTC CTGAAAATCT TACCGTTCTT
TCTGCTCAGA ATGTTTCCAT TACCAAAAGC ATTTTTAATA CACTTGAAGG ATTTGATTCA
ACGTTAAAAG ATATTGAGGA TTATGATCTG GCACTGCGTG CAAGATCAAA AAACATTCCG
GTATTTTATC TGGATACAGC AATCGCTATC CACGTTGATT TTTTTTCCTT TTATAAATAT
GCCCTGCGTT CAAAAGAGTA TTTTAAAAAC CGCCGGCTGG CTGCCCGTTT CAATCCGGAA
TTATATGCAA GCGATAAAAT TCTGACGCAT AAAAATTCAT TGCTGCAGAA GGGCGTATAC
CGGATTCTAC GTTTTCCGTT TTGGCTGCAT ATTTTAGATT CCGCCAATAT ATTCCGCTTT
CTGTTACCCA GACAGGTCCG CTACAAACTT TATGGCATTA TCATCACCGC ATTTGCACAT
AATCAATAA
 
Protein sequence
MKAIQASVII PSFNGKDKVI GLLKSIEKQT VTNVEVLVVI DGSTDGSADA LRSTDWKLQL 
RLIEQENKGR AGARNTGAGE AQSELLIFFD DDLMLDPACI EKHISANDLS VKRIVMGQVI
EPSNAADTEI KKYKDYLNES WATVLDPYKQ KNFPENLTVL SAQNVSITKS IFNTLEGFDS
TLKDIEDYDL ALRARSKNIP VFYLDTAIAI HVDFFSFYKY ALRSKEYFKN RRLAARFNPE
LYASDKILTH KNSLLQKGVY RILRFPFWLH ILDSANIFRF LLPRQVRYKL YGIIITAFAH
NQ