Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_3451 |
Symbol | |
ID | 4186029 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 3986922 |
End bp | 3988985 |
Gene Length | 2064 bp |
Protein Length | 687 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638073439 |
Product | hypothetical protein |
Protein accession | YP_680028 |
Protein GI | 110639818 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00623821 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAAAAAAA ATATATTCTT ATTCTTAAGC TTATTTATAA CGCAGTTAAC CTTTGCTCAA AAAGCAGATA CCCTTGGTTT GGTTACGCAG GTTAGCTCAA CAGGCGTACT GTTAAAATGG CTCCCATCAA ACTATAATCT GTGGATGGAG GGAACGCGTG TGGGTTATAA CATACAGCGT TCAGAAGTTC AGTTAAAAGA CGGCAAATGG AAAGTAATTA CAACAACACT GTTAACATCT GAAGCAATTA AACCGTGGTC CAACGAGCGT ATAACCAATG AAGCAAAGAC GAATCCGGAA TTAAATAATG CGAAAATACT GATTGCAGGC AGGCTTCTTC AGGAAAACGC ACAGCCGGGA ACCTCTACTT CGAATGCCGC AGAAATACAG GGCCAGAAGG AATATGTATA TGTAATGTCT TTATTGGCAA ACCTGTTAAA AAATAAATCA TCAGAAGCGA TGGGTTTATT CTACGAAGAT AAAACAGCCT TACCCGGTAA AACCTATTTG TATGAAGTAA CGGTTAATAC TGCAAAAAAA ATAAAAGGGT CCGAGGTTGT TACAATGAAT CAACCCGTGG CATTGCCTAA CGTAATGGGC TTCGATTTTT ATGTTGTAAA TAAGTCTGTT GAATTGTACT GGCTGCAGCC AAAGTATTCC GGTTACTTTG CGTATGATGT ATACCGTTCA TTATCTAAAA ACGGCACCTA TGAAAAAGTA AATAACAATC CTTATCTGGG AGAACTGGGA CTTACAGTAG ATGAAAAAAG AATGGTGTTC ATCGATTCAT TTCCCGAAAT GAATAAAACA TATTATTACA AAGTAAAAGG GATTAATGCC TTTGAACAGA CAAGTGCATT CAGTGAAATA CTAACGGTTA AAGCTGTAAC CTTTATACAA TATGCGCCGA ATATCAGTAA AGCTTCTTCA AAAGATAACA TACGTATTGA TCTGGAATGG GAAGTAAACC CGGTAGATAA AGAAAATGTT GCATCATTTT CTGTCTGGAC AGCAAAAACG CAAAACGATG TAATGAAGAA ACTGAATGAC AAACCGATTT CGCCAAAAAC ATATACCTAT ACGGATGCCC GTCTCAATAA GCCTACCTTC AATTATTACA GAGTCTGCGC TTATGGGTAT ACGGGAGATT CAACCTGCTC GCTTTTAAAG GATGGTTTTT TAGTGGATTC AGTTCCGCCG TCAAAACCCA TTGTAGTGTC AGGTATCTGC GATACAAACG GTGTGGTAAC CCTGATCTGG AAAAAAAATA AAGAAGCGGA TATGTATGGG TATCGTATTT TCAGAACCTT CTACAAACAC AAGGAGCCAA CGCGTATCAC AGATTCTACT TATAAAGACA CGGTCTATAT TGATAAGGTT GATGTTAACT CCGGCTGGAA AAAAATATAT TATGCTGTAG TTGCAATCGA TGAAGTGTTT AATGCGTCCC GCCAATCACA GTATGTTGAA GTACTGCTGC CGGATAAAGT ACCGCCTACC AATGCCGTGT TTAAAGATTT TAAAACGGGT TATTCCGGCA TTACATTAAC ATGGTCGCCG AGTTCGTCGG ATGATGTAAA GTATCAATAT CTCTATAAGA AATCCGAATT TGAATTTCAA TGGCAGCAAT TTGTACGGTT GGGCGGCGAC AGTTTAAAAA TTACATCCAT TCGTGATACC CTCACACAAA CAGATGTGTG GTATGAATAC AAATTAGTCG CAGAAGATTC ATCGGGTTTA CGCTCCCCTG AAGAACAGGT GATCCGTATA CAACAGCCTG AAAAAGATCC GTTCCCGCAG GTTACAAACA TTAAAGCAGT TGCAAGCCGC CCCAATAAAA TGATCAAGCT CACGTGGGAC TTTAACAAAC AGGCAACAGG TTTTAAAATT ATGCGTTCGC AAAATGGGCA ACAGGTAGAG ACCTATGAAT TTGTAAAAGG CACCAAACGC GAATTTTATG ATACCTGGCT AACAACCAAT ACCGAATATA CGTATGCCAT TATCGCTGAA CTGCCCGATG GCAGAGAATC TGTAATGAGT GTAGTGATTA AAATAAAATA TTAA
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Protein sequence | MKKNIFLFLS LFITQLTFAQ KADTLGLVTQ VSSTGVLLKW LPSNYNLWME GTRVGYNIQR SEVQLKDGKW KVITTTLLTS EAIKPWSNER ITNEAKTNPE LNNAKILIAG RLLQENAQPG TSTSNAAEIQ GQKEYVYVMS LLANLLKNKS SEAMGLFYED KTALPGKTYL YEVTVNTAKK IKGSEVVTMN QPVALPNVMG FDFYVVNKSV ELYWLQPKYS GYFAYDVYRS LSKNGTYEKV NNNPYLGELG LTVDEKRMVF IDSFPEMNKT YYYKVKGINA FEQTSAFSEI LTVKAVTFIQ YAPNISKASS KDNIRIDLEW EVNPVDKENV ASFSVWTAKT QNDVMKKLND KPISPKTYTY TDARLNKPTF NYYRVCAYGY TGDSTCSLLK DGFLVDSVPP SKPIVVSGIC DTNGVVTLIW KKNKEADMYG YRIFRTFYKH KEPTRITDST YKDTVYIDKV DVNSGWKKIY YAVVAIDEVF NASRQSQYVE VLLPDKVPPT NAVFKDFKTG YSGITLTWSP SSSDDVKYQY LYKKSEFEFQ WQQFVRLGGD SLKITSIRDT LTQTDVWYEY KLVAEDSSGL RSPEEQVIRI QQPEKDPFPQ VTNIKAVASR PNKMIKLTWD FNKQATGFKI MRSQNGQQVE TYEFVKGTKR EFYDTWLTTN TEYTYAIIAE LPDGRESVMS VVIKIKY
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