Gene CHU_3451 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3451 
Symbol 
ID4186029 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3986922 
End bp3988985 
Gene Length2064 bp 
Protein Length687 aa 
Translation table11 
GC content39% 
IMG OID638073439 
Producthypothetical protein 
Protein accessionYP_680028 
Protein GI110639818 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00623821 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAAAAAAA ATATATTCTT ATTCTTAAGC TTATTTATAA CGCAGTTAAC CTTTGCTCAA 
AAAGCAGATA CCCTTGGTTT GGTTACGCAG GTTAGCTCAA CAGGCGTACT GTTAAAATGG
CTCCCATCAA ACTATAATCT GTGGATGGAG GGAACGCGTG TGGGTTATAA CATACAGCGT
TCAGAAGTTC AGTTAAAAGA CGGCAAATGG AAAGTAATTA CAACAACACT GTTAACATCT
GAAGCAATTA AACCGTGGTC CAACGAGCGT ATAACCAATG AAGCAAAGAC GAATCCGGAA
TTAAATAATG CGAAAATACT GATTGCAGGC AGGCTTCTTC AGGAAAACGC ACAGCCGGGA
ACCTCTACTT CGAATGCCGC AGAAATACAG GGCCAGAAGG AATATGTATA TGTAATGTCT
TTATTGGCAA ACCTGTTAAA AAATAAATCA TCAGAAGCGA TGGGTTTATT CTACGAAGAT
AAAACAGCCT TACCCGGTAA AACCTATTTG TATGAAGTAA CGGTTAATAC TGCAAAAAAA
ATAAAAGGGT CCGAGGTTGT TACAATGAAT CAACCCGTGG CATTGCCTAA CGTAATGGGC
TTCGATTTTT ATGTTGTAAA TAAGTCTGTT GAATTGTACT GGCTGCAGCC AAAGTATTCC
GGTTACTTTG CGTATGATGT ATACCGTTCA TTATCTAAAA ACGGCACCTA TGAAAAAGTA
AATAACAATC CTTATCTGGG AGAACTGGGA CTTACAGTAG ATGAAAAAAG AATGGTGTTC
ATCGATTCAT TTCCCGAAAT GAATAAAACA TATTATTACA AAGTAAAAGG GATTAATGCC
TTTGAACAGA CAAGTGCATT CAGTGAAATA CTAACGGTTA AAGCTGTAAC CTTTATACAA
TATGCGCCGA ATATCAGTAA AGCTTCTTCA AAAGATAACA TACGTATTGA TCTGGAATGG
GAAGTAAACC CGGTAGATAA AGAAAATGTT GCATCATTTT CTGTCTGGAC AGCAAAAACG
CAAAACGATG TAATGAAGAA ACTGAATGAC AAACCGATTT CGCCAAAAAC ATATACCTAT
ACGGATGCCC GTCTCAATAA GCCTACCTTC AATTATTACA GAGTCTGCGC TTATGGGTAT
ACGGGAGATT CAACCTGCTC GCTTTTAAAG GATGGTTTTT TAGTGGATTC AGTTCCGCCG
TCAAAACCCA TTGTAGTGTC AGGTATCTGC GATACAAACG GTGTGGTAAC CCTGATCTGG
AAAAAAAATA AAGAAGCGGA TATGTATGGG TATCGTATTT TCAGAACCTT CTACAAACAC
AAGGAGCCAA CGCGTATCAC AGATTCTACT TATAAAGACA CGGTCTATAT TGATAAGGTT
GATGTTAACT CCGGCTGGAA AAAAATATAT TATGCTGTAG TTGCAATCGA TGAAGTGTTT
AATGCGTCCC GCCAATCACA GTATGTTGAA GTACTGCTGC CGGATAAAGT ACCGCCTACC
AATGCCGTGT TTAAAGATTT TAAAACGGGT TATTCCGGCA TTACATTAAC ATGGTCGCCG
AGTTCGTCGG ATGATGTAAA GTATCAATAT CTCTATAAGA AATCCGAATT TGAATTTCAA
TGGCAGCAAT TTGTACGGTT GGGCGGCGAC AGTTTAAAAA TTACATCCAT TCGTGATACC
CTCACACAAA CAGATGTGTG GTATGAATAC AAATTAGTCG CAGAAGATTC ATCGGGTTTA
CGCTCCCCTG AAGAACAGGT GATCCGTATA CAACAGCCTG AAAAAGATCC GTTCCCGCAG
GTTACAAACA TTAAAGCAGT TGCAAGCCGC CCCAATAAAA TGATCAAGCT CACGTGGGAC
TTTAACAAAC AGGCAACAGG TTTTAAAATT ATGCGTTCGC AAAATGGGCA ACAGGTAGAG
ACCTATGAAT TTGTAAAAGG CACCAAACGC GAATTTTATG ATACCTGGCT AACAACCAAT
ACCGAATATA CGTATGCCAT TATCGCTGAA CTGCCCGATG GCAGAGAATC TGTAATGAGT
GTAGTGATTA AAATAAAATA TTAA
 
Protein sequence
MKKNIFLFLS LFITQLTFAQ KADTLGLVTQ VSSTGVLLKW LPSNYNLWME GTRVGYNIQR 
SEVQLKDGKW KVITTTLLTS EAIKPWSNER ITNEAKTNPE LNNAKILIAG RLLQENAQPG
TSTSNAAEIQ GQKEYVYVMS LLANLLKNKS SEAMGLFYED KTALPGKTYL YEVTVNTAKK
IKGSEVVTMN QPVALPNVMG FDFYVVNKSV ELYWLQPKYS GYFAYDVYRS LSKNGTYEKV
NNNPYLGELG LTVDEKRMVF IDSFPEMNKT YYYKVKGINA FEQTSAFSEI LTVKAVTFIQ
YAPNISKASS KDNIRIDLEW EVNPVDKENV ASFSVWTAKT QNDVMKKLND KPISPKTYTY
TDARLNKPTF NYYRVCAYGY TGDSTCSLLK DGFLVDSVPP SKPIVVSGIC DTNGVVTLIW
KKNKEADMYG YRIFRTFYKH KEPTRITDST YKDTVYIDKV DVNSGWKKIY YAVVAIDEVF
NASRQSQYVE VLLPDKVPPT NAVFKDFKTG YSGITLTWSP SSSDDVKYQY LYKKSEFEFQ
WQQFVRLGGD SLKITSIRDT LTQTDVWYEY KLVAEDSSGL RSPEEQVIRI QQPEKDPFPQ
VTNIKAVASR PNKMIKLTWD FNKQATGFKI MRSQNGQQVE TYEFVKGTKR EFYDTWLTTN
TEYTYAIIAE LPDGRESVMS VVIKIKY