Gene CHU_3439 details

Gene Information

• Locus tag: CHU_3439
• ID: 4185371
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Cytophaga hutchinsonii ATCC 33406
• Kingdom: Bacteria
• Replicon accession: NC_008255
• Strand: -
• Start bp: 3933896
• End bp: 3941260
• Gene Length: 7365 bp
• Protein Length: 2454 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 638073427
• Product: glycerol kinase-related
• Protein accession: YP_680016
• Protein GI: 110639806
• TIGRFAM ID: [TIGR01451] conserved repeat domain

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 49
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAAAATGA AGAAGCATAG AGGCGGGATT AGTAGATACT TACTTGGTAT TGTTTTTATA 
CTGTTATCAT TCTATAGTTT TGCGCAGTGC GGTACAGAAA CGTTTACGGT AAAAGACTGG 
TGTGAGAATT CCTATGCGGA ATGGACAATA ACCAACCCCG ATCCTACTGC CAAATACCAC 
TGGTATGAAC CTGTATACAA TGCTGCCGGA ACAGTTATTG TTGATACACT GGATAGAAAT 
TACGGAGAAA ATACTGCGGG TACGTATTTT GTTTCCCCAT ACAGATATAC AACCCCTTCA 
CCTACACCAG TAACGCCAGG CTGGGACAAC CGTACCTTCT GGTATGTAAA GGAAAAGCCT 
GCAACATTCA GCTTAAATAA TCCAACAGCT GAAAACCATG CAGTAGCACC GGCAACCGGC 
TATAGTATGA ATTTTACATC TACGCTTGAG ACACGTATAA ATTATGTTAC GATTCCATTT 
TTCTCCTATT ATGTAGATCC GGGTAGAACA TGGTATGTTC AGGTACAGAT AGGTACAAAG 
TATTCGGCAA TTTATTATTT CAATTCAACA AACCTTACAA GAGTAACAAC AAATGTATAC 
TTATTGCGTG TACCGGTATT TATTGATACT CCGGCTGGTT CCTATACAAT GAGTGTTGTT 
ACAAACCCGG CATCGCCAAC GCCAGGAACA GTTGCAATCG GAACAAATCA GCTGGATCTT 
GCCATGCTGA ACACAGCTAC TACATTTCCA ATTAACAATA CTGCAGGTAT TAATATTACC 
GGATCATCGA ATGCAGGAAG ATCAATGATC TATAAATGGG AAACAGATAC TTATTGCCCA 
TATAGATTTA CACCTGCAGC TAAAAAAACG ACAACAGGCT GTTGCGTACC CGTTCTTGTA 
ACCGGTGTTG TGGTAGCATC AAATCCGATC ATTGTGAGCG GCACAGACAA TACCGATCTG 
GATGTTACCG TATATGAAAG CACGTCAAAC TATTTTCAAT GGTATAAAGA TGGTGTGGCT 
ACTACAGGCG GAGCAGGCTT AATACATATC AATGTGAATC AGGCGGGTGT TTATTCAGTC 
CGTGAAGTTA AAGTTGCCGC AGATCTCAAC AAAGTCAGCT GTTACCAGGA AGCAACGGTA 
ACGGTTTCTG AACGTTCCTT ATTTGCACGG GTAAATAATC CGAAAGCGAG TTATTGTGTC 
GGAGACAAGG TTACGGTTGA AGCGTATGGA TCAAACATCG GTTCTGTAGC CTGGACTCCG 
GCATCACTGG CAACGTCTCC CAATTCAAAA ATCACGGAAG TAACATTAAA CGCTACCGGA 
ACATTAAATT TTACAGCTAC AGCTCAGGTG TTCACCGGTC CGTCTATCAT CAACGGTGAC 
TTTGAAGCCG GCAATACCGG TTTTACGAGT GACATGACAA ATACTACCGG AACGCCTTCC 
AGCGGGCAGT ACCGCATTGA TACCTACGTA ACAGAACAGC AGTCTTACTG GAGTGCTTCT 
GCAACACCCT CGCCTGCCGC ACAAATGAAA GGTTCCGGAA GATTTTTATA CTCAGATGGT 
TTCCAGACGT ACCAGCCGGG AAGTATCATC TGGAAACAAA CAGTTCCGGG ACTAAGCCAG 
AATCAGAATT ATACGTTTTC CATGGATCAT GCAAACATTT CCTGGAATTC AGATCCTTCC 
AATACAGCCC GCGTAGCAGA TATTGATACA AAATTTGATA TCTATATCAA CAACGTTAAA 
ATTACAACGT TTACAACAGA TGGTCAAGGC CAGTATGCAG GTGTGGGCCG CTGGAAAACC 
GATCAGGTGG TTTGGAATTC AGGTACGGCA ACACAGGCAG TTATCGAAAT CAGACAGCAG 
GTGAAAGGTG GTACCGGATA TGACTTTGCC ATTGACAATA TTTTATTTGG CGGGCCTGTA 
CTGCAAACAG CAACGGTAAG TGTTGGTCCG ATCGCTGATT GTTTCGACGT TATTCCAAGC 
CAGAGCGCCT GCGTAGGAGC GAATAAAACA CTAACGGCAA AAGCAATCAA TACCGTTACA 
GGAGAAGAAG TAGGGGTAAT TGACCGCTGG GAAGCACCGG TAGGTACGGT AGTAGGTACC 
GGTAAAACAA TTACGGTATC GCCTGCCGTT ACAACAACGT ATACCGTGTA TGCACGTTTT 
CCTGCATCAA ATTTAATACA GAACAGTGAT TTTGAACTGG GTGCCAATGG GTTTAAATAT 
GGTACGGCCA ATGGATTGTA TAACCAGGGA AATTCCCAGG GAAATTTTCA GGTACTGAAA 
AATCCTACTA CTACCGGATG CGGTGGATAT TGTGTGAATT TGGGCGACCA TACAACCGGT 
ACCGGAAATA TGTTATTTGT GGATCCGCAA ACGGCAGATG GAAATGTGAT TGCCTATGAT 
TTCAATGCCA TTGGCGGACA GAGTTATCTG TTTTCGTTAT GGGTGGCGAA TGCCGTTAAT 
TTTGCCAGCA ATGCAAATCC ACTTCTTTCC AGCGTAAGTT TCATAGTAAA TGGTCCGGGT 
GTTACCAACC AGACAATTGC AAGTATCAAT ACAACAAAAG ACAATGTCTG GAACCAGTTG 
AGTACTGTCT GGACACCGCC ATCCAATGGG GCATATACAT TAACCATCCG TGCGAAAGGG 
GATGCAACGT TGCAGGCATT GCAACCGGGC AATTCCGGCG GAAATGATTT TGTTATTGAT 
GACATCATCC TGGCAGAGCC AACCAGTAAA GTATATTCCA AAACAATTGT TGTTACACCC 
TGCGTTACCT GTACACAGCC AACAAGTGTT ACCATTACAA CGCCGGCGGC AGCTACGGTA 
ACCATCTGCC AGGGTACCGC ACAAACATTA TCCGGAACGG TTACCGTACC GGCTGCATCA 
TCGGCAACCG GCGGATACAG ATATCTATGG ATCAAAATGG GTGCTACTCC TGCAGCCAAT 
ACGGTGCTGA CATCCGGCGC AATAACGCCA GCAATCAATA CAGCAACAGC AGTACCTGAT 
TATACAGGTA TAACCGGTGC GTTGACGGAT GCAGGTAAAT ATATTTTGCG TGTTGAAGAC 
GGCACAGCAG GAAATCCAAC ATGTTTCAGA GACGATACGC TAACCCTTGT TATAAACCCG 
ACAACAGTTG CGGGTTCCAT AGCCGCAGCG CAGACGATCT GTACGGGCGG CGACCCGGTA 
GCCTTTACCA GCGTAGCAGC TACCGGCGGC AACGGGACAA CATATTCGTA TGTATGGGAA 
AAATCGATCA ACGGAGCAGC GTATGCCGAT ATTACACCTG CAGTTACTAC AGCTACTTTT 
GATGAAGGCG TATTAACCAA TGCAGGGACA ACAGCCATGA CGGTTGACTA CCGCCGTAAA 
GTTACTTCCG GGGCCTGTCC GCAGGTCACC ACAGCCGCTG TCCGTATCAC GGTTAACCCA 
GCCATTGTTG CGGGCATAGT TGCGGCCGAC CAGACGATCT GTTCAGGCGG GGATCCGGCA 
GCCTTTACGG TAACGGCGAC CCCGACAGGA GGCACAGGCA CGTATACTTA CCAGTGGCAG 
AGCGCTTCAG CCCTTGCAGG TACATATACC AATATAGCCT CAGCAACAGG AGCCACCTAC 
GATGTTCCAT CGGGCTTAAC AGCAACCACG TATTACAGAA GAGTAGATGC CTCAGGCACC 
TGTACAACAG TCAACACCAA TGTTATCACT GTCACGGTTC AGCCGGCTTT AGTTCCGGGT 
ACTGTAACAG CCGATCAGAC CATCTGTTAC AATACAGCAC CGGCAGCATT CACAAGCACA 
GCAGCTGCCA GCGGCGGCAA CGGTACTAGC TATGCGTATC AGTGGCAGAC CAGCACAACA 
GCTGCAGGCG TCTATACAGA TATTGCCGGA GCAACCAATG CAGCATTTAC AGACGCGACC 
CTGCTTACAG CAGATAAATA TTACAGAAGA AAGGTTACTT CCGGTACCGT TGCTACCTGT 
AATATAGCCT ATACCGCAGC GATCCATATA ACCGTTTCTC CCGATCTTGT TGTTGGGAGT 
ATTGGCACCG CACAGACCAT CTGTACAGGT ACAGCTCCTG CAACTCTAAC AAGCATAAGC 
CTTCCAACCG GAGGTAAAAC ACCCTATACA TACCAATGGC AATCCAGTCC GGATAACGGA 
ACAACTCCTT GGTCTAATAT CGGTTCAGCT ACAAGTGTAG ATTACACTCC TGGCACGTTA 
AGTACAGATA TGTACTACAG AAGGTCAGAT ATTTCAGCTG GCGGCTGCGG AACATTATAT 
ACAGCAAGCA TAAAAATCAC GGTTGATCCT TTAGTAACAG CAGCTGTTAT TTCATCCGAC 
CAGTCAATCT GTTCAGGCGC AGCACCCTCT CAGATCGGCG GCGCGGCAGC AGCAGGGGGT 
TCAACTACTG CCACGGCAGG TTATGTATGG GAAGTATCAA CAACCTCAGG GAGCGCGGAC 
TTCAGCGCAA TTTCAGGGGC TACATTAAAA GACTATACAC CGGGTACCTT AACAGTTGAT 
ACCTGGTACA GAAGAGTTGA TAAGAAGGGT ACATGCGCGG GAGTAGCTTC GAATGCGGTT 
AAGATTTCTA TTGTAGCAGT AGCACCAGCT ACCGTATCGT TATCCCGGTT ACCATCTGGC 
CCGATCTGCG AAGGTACCAA TGTTACCTTT ACGGCCAGCG TTGGCAACGG CGGCACACCT 
GCTTATGTAT GGACATCCTC TGTAACGGGT GCGTTGGCTT CAACCACAGA TACGTATTCA 
AGCACAACGC TTGTAGACGG AGAAGTTATC ACCGTTGATA TTACCAGCAG CTTAAGCTGT 
GCGAACCCGA AAACAGCGAC AGCGAGTTCT ACGATGGTTG TGAATACAAA AGTAACGCCA 
ACGATATCGA TCACAGCAGA CAAGACAACG ATCTGTCCGA GTGAGAGTGT AACCTTCAGC 
ATCACAGCCC AGACCAATCA GGGTACAGCT CCTGCCGGCC CAACGTACCA GTGGCAGACC 
AATAAGAGCG GTACTTACCA GAATATTTCA GGAGCGACAA ACAGCACATA TATAGCCTCT 
TCGGTTACCA ATGGGGAATC GTTCCGTGTA GTAATGACAA CAGGCTTAAC GTGTGTAACG 
TCAGCTACCG CCGTCTCCAC ACCGGTAGCC GTTACGGTTA CCCCTGTACC GACCTTATCG 
GTAAGCATTG CAGCTGATAA GGCCACGATC TGTTCAGGTA ATGCGGTTCA GTTTACCGCT 
ACCGCAACGG GTTCAGGCTC CACACCTGCG CCAACGTATG AGTGGTTCAT CGGAGCGGCA 
GGTTCAGAAA CCAGCCAGGG AGCAGGTTCC ACCACGGCGA ACCCGTACAG CACAACATCG 
TTAACGACCA CAGCAGCGTT AAGCCCTCAG ACCTACAGCA TTTATGTAAG AGCGACCAGC 
AATGCAACCT GCGCGAGCAC CACTCCGGCA CAGTCCGCAG CGGTCACTGT TACGGTAAAT 
GCCGGAGTTG GCGCGGGAAC AATCACAACA ACGTTATTAA CGATCTGCAA CAACACCGTT 
CCCGGTGCGA TTACTGAAGC AAGCGCTGCC AGCGGAGGCA CTTCCCCGAC CTATACGTGG 
GAAGAATCCA TTGACAACGG GGCCTGGGGC CCTGCCACAG GCACTGTAAG CGGTACGGGC 
TTTACACCGA GCGGCGCCAA AACAGGCACC AAAGTATCCT ACAGAAGAAT TGTAACCTAT 
ACAAGCATCC CGGCTCCATG CAACACAGCC ATGAGCAACA TTATCGACAT CACGGTTAAC 
CCTGCTTTAG TGGCCGGCGT TATCCAGGAT GATCAGATAA TCTGTTCAGG ATTGGTTCCG 
GCAGCGCTTA CCCAGGTAAG CGCGCCAACA GGCGGTACAG GCAGCTATAC CTACCAGTGG 
CAGAGCAGCA CCACAGGCAC AGCCGGTTCG TTCAGCAATA TTGGCGGAGC CACCACATCT 
GGCTATGCAC CGGGCGCATT AACGGCAACC ACCTACTACC AGCGCGTGGA AACGTCCGGC 
ACATGCGGGA GTGTCACCGG CAATATGGTA ACCATCACCG TATCGACCCC CGAAGTAGTA 
ACAGCCCAGA TCAACGATCC GGGTCAGGTA TGCGAGGGTT CAGTGCCGAT GGTGTTTACG 
GCCACCACAA CGGGATCCGG TACCTTAACG TATGCCTGGA CACTTGACGG AGCACCGGTA 
GGCACCAACA GCAGTACATA CAGCTATAAC CCAACCACAG CATCCGATGC AGGCAAAAAA 
GTAAAAGTAG TTGTAACGAC CTCAATCGGC TGTAATGCCG GTCCTGGTAT CTCCAATGAA 
GTAGCCCTGA ATATTGTTGT ATCAAGCATG CCTTCGGTAA GCATCACGGG AGCGCCTGCG 
GTACAGTGTT CCGGTTTACC GGTCCGCTTT ACGGTAAGCA ATACCACAGC CGGTGGCAAC 
AATCCGACCT ACCAGTGGTT CATCGAATCA CAGGCAGGTG TAGCCACCGC AGTAAGCGGG 
GCAACCAATA CAAGCTTTAC CAGCACAGGC TTAACTGCCG GGGATAAGGT GTATGTGGAA 
CTTACTTCCA ATCTTGGCTG CGCACTGGGT ACCAACCCGC ACGCTTCCAA TAAGATCGCA 
CCAGCGATCC TTGCTACACC GGCTCCGGTG ATCAATGAGA CACCGCTTCC GATCTGCAGC 
CCGGAAGGGT TTGAGTTCAC CGCTGTAGTA GGAAGTGCAA CGCCTCCAAA TACGCTGCAG 
TGGTATAAGG ATGGCGTAGC GATAAGCGGA GCAACCACAA GCATCTATAA AGCCTTTGAA 
AGCGGACTTT ATTCGATAGA GGAAAGCAAT GCAGCGTGCG GCACGATCTC CACGGAAGTA 
CCGCTTACCG TAATCCAGAC GCCGGTAGCC AATGCGGGTT CAGATATCAC GGTAAAAGAA 
GGAGAGCAGG TAACGCTGAA CGGCAGCGGG GGAGTAATCT ACAGCTGGAG CCCGGATACG 
GGTCTTGATG ATGCCAGTTC AGCCACTCCG AAGTTAACAG CTGATAAGAC AATCATGTAT 
ATCTTAACGG TTCGTGATGC CACAGGCCAG TGCCATGATG ATGATGAAGT AATGGTGTTT 
GTGGAGCGTC CGATCAAGGT ACCCAATGTA ATAACAGTAA ACGGGGATGG AGTGAACGAT 
ACCTGGGAGA TTGAGAACAT CGAGAGCTTC CCCAATGCCG AGTTCCTGAT CTACAACCGC 
TGGGGGAACC TGGTGTGGAA GAGCACAGGG TATCCCAAGG AGTGGGATGC GACCAACTTC 
CGCAACGGGG AAGTATTGCC TGACGGTACC TACTTCTACA TCATCGACCT GCACAGCACC 
ATCTATACAG AAGCGTACAC CGGGTATATA CAGGTTGTGA AATAA 

 

Protein sequence

MKMKKHRGGI SRYLLGIVFI LLSFYSFAQC GTETFTVKDW CENSYAEWTI TNPDPTAKYH 
WYEPVYNAAG TVIVDTLDRN YGENTAGTYF VSPYRYTTPS PTPVTPGWDN RTFWYVKEKP 
ATFSLNNPTA ENHAVAPATG YSMNFTSTLE TRINYVTIPF FSYYVDPGRT WYVQVQIGTK 
YSAIYYFNST NLTRVTTNVY LLRVPVFIDT PAGSYTMSVV TNPASPTPGT VAIGTNQLDL 
AMLNTATTFP INNTAGINIT GSSNAGRSMI YKWETDTYCP YRFTPAAKKT TTGCCVPVLV 
TGVVVASNPI IVSGTDNTDL DVTVYESTSN YFQWYKDGVA TTGGAGLIHI NVNQAGVYSV 
REVKVAADLN KVSCYQEATV TVSERSLFAR VNNPKASYCV GDKVTVEAYG SNIGSVAWTP 
ASLATSPNSK ITEVTLNATG TLNFTATAQV FTGPSIINGD FEAGNTGFTS DMTNTTGTPS 
SGQYRIDTYV TEQQSYWSAS ATPSPAAQMK GSGRFLYSDG FQTYQPGSII WKQTVPGLSQ 
NQNYTFSMDH ANISWNSDPS NTARVADIDT KFDIYINNVK ITTFTTDGQG QYAGVGRWKT 
DQVVWNSGTA TQAVIEIRQQ VKGGTGYDFA IDNILFGGPV LQTATVSVGP IADCFDVIPS 
QSACVGANKT LTAKAINTVT GEEVGVIDRW EAPVGTVVGT GKTITVSPAV TTTYTVYARF 
PASNLIQNSD FELGANGFKY GTANGLYNQG NSQGNFQVLK NPTTTGCGGY CVNLGDHTTG 
TGNMLFVDPQ TADGNVIAYD FNAIGGQSYL FSLWVANAVN FASNANPLLS SVSFIVNGPG 
VTNQTIASIN TTKDNVWNQL STVWTPPSNG AYTLTIRAKG DATLQALQPG NSGGNDFVID 
DIILAEPTSK VYSKTIVVTP CVTCTQPTSV TITTPAAATV TICQGTAQTL SGTVTVPAAS 
SATGGYRYLW IKMGATPAAN TVLTSGAITP AINTATAVPD YTGITGALTD AGKYILRVED 
GTAGNPTCFR DDTLTLVINP TTVAGSIAAA QTICTGGDPV AFTSVAATGG NGTTYSYVWE 
KSINGAAYAD ITPAVTTATF DEGVLTNAGT TAMTVDYRRK VTSGACPQVT TAAVRITVNP 
AIVAGIVAAD QTICSGGDPA AFTVTATPTG GTGTYTYQWQ SASALAGTYT NIASATGATY 
DVPSGLTATT YYRRVDASGT CTTVNTNVIT VTVQPALVPG TVTADQTICY NTAPAAFTST 
AAASGGNGTS YAYQWQTSTT AAGVYTDIAG ATNAAFTDAT LLTADKYYRR KVTSGTVATC 
NIAYTAAIHI TVSPDLVVGS IGTAQTICTG TAPATLTSIS LPTGGKTPYT YQWQSSPDNG 
TTPWSNIGSA TSVDYTPGTL STDMYYRRSD ISAGGCGTLY TASIKITVDP LVTAAVISSD 
QSICSGAAPS QIGGAAAAGG STTATAGYVW EVSTTSGSAD FSAISGATLK DYTPGTLTVD 
TWYRRVDKKG TCAGVASNAV KISIVAVAPA TVSLSRLPSG PICEGTNVTF TASVGNGGTP 
AYVWTSSVTG ALASTTDTYS STTLVDGEVI TVDITSSLSC ANPKTATASS TMVVNTKVTP 
TISITADKTT ICPSESVTFS ITAQTNQGTA PAGPTYQWQT NKSGTYQNIS GATNSTYIAS 
SVTNGESFRV VMTTGLTCVT SATAVSTPVA VTVTPVPTLS VSIAADKATI CSGNAVQFTA 
TATGSGSTPA PTYEWFIGAA GSETSQGAGS TTANPYSTTS LTTTAALSPQ TYSIYVRATS 
NATCASTTPA QSAAVTVTVN AGVGAGTITT TLLTICNNTV PGAITEASAA SGGTSPTYTW 
EESIDNGAWG PATGTVSGTG FTPSGAKTGT KVSYRRIVTY TSIPAPCNTA MSNIIDITVN 
PALVAGVIQD DQIICSGLVP AALTQVSAPT GGTGSYTYQW QSSTTGTAGS FSNIGGATTS 
GYAPGALTAT TYYQRVETSG TCGSVTGNMV TITVSTPEVV TAQINDPGQV CEGSVPMVFT 
ATTTGSGTLT YAWTLDGAPV GTNSSTYSYN PTTASDAGKK VKVVVTTSIG CNAGPGISNE 
VALNIVVSSM PSVSITGAPA VQCSGLPVRF TVSNTTAGGN NPTYQWFIES QAGVATAVSG 
ATNTSFTSTG LTAGDKVYVE LTSNLGCALG TNPHASNKIA PAILATPAPV INETPLPICS 
PEGFEFTAVV GSATPPNTLQ WYKDGVAISG ATTSIYKAFE SGLYSIEESN AACGTISTEV 
PLTVIQTPVA NAGSDITVKE GEQVTLNGSG GVIYSWSPDT GLDDASSATP KLTADKTIMY 
ILTVRDATGQ CHDDDEVMVF VERPIKVPNV ITVNGDGVND TWEIENIESF PNAEFLIYNR 
WGNLVWKSTG YPKEWDATNF RNGEVLPDGT YFYIIDLHST IYTEAYTGYI QVVK