Gene CHU_3439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3439 
Symbol 
ID4185371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3933896 
End bp3941260 
Gene Length7365 bp 
Protein Length2454 aa 
Translation table11 
GC content49% 
IMG OID638073427 
Productglycerol kinase-related 
Protein accessionYP_680016 
Protein GI110639806 
COG category 
COG ID 
TIGRFAM ID[TIGR01451] conserved repeat domain 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATGA AGAAGCATAG AGGCGGGATT AGTAGATACT TACTTGGTAT TGTTTTTATA 
CTGTTATCAT TCTATAGTTT TGCGCAGTGC GGTACAGAAA CGTTTACGGT AAAAGACTGG
TGTGAGAATT CCTATGCGGA ATGGACAATA ACCAACCCCG ATCCTACTGC CAAATACCAC
TGGTATGAAC CTGTATACAA TGCTGCCGGA ACAGTTATTG TTGATACACT GGATAGAAAT
TACGGAGAAA ATACTGCGGG TACGTATTTT GTTTCCCCAT ACAGATATAC AACCCCTTCA
CCTACACCAG TAACGCCAGG CTGGGACAAC CGTACCTTCT GGTATGTAAA GGAAAAGCCT
GCAACATTCA GCTTAAATAA TCCAACAGCT GAAAACCATG CAGTAGCACC GGCAACCGGC
TATAGTATGA ATTTTACATC TACGCTTGAG ACACGTATAA ATTATGTTAC GATTCCATTT
TTCTCCTATT ATGTAGATCC GGGTAGAACA TGGTATGTTC AGGTACAGAT AGGTACAAAG
TATTCGGCAA TTTATTATTT CAATTCAACA AACCTTACAA GAGTAACAAC AAATGTATAC
TTATTGCGTG TACCGGTATT TATTGATACT CCGGCTGGTT CCTATACAAT GAGTGTTGTT
ACAAACCCGG CATCGCCAAC GCCAGGAACA GTTGCAATCG GAACAAATCA GCTGGATCTT
GCCATGCTGA ACACAGCTAC TACATTTCCA ATTAACAATA CTGCAGGTAT TAATATTACC
GGATCATCGA ATGCAGGAAG ATCAATGATC TATAAATGGG AAACAGATAC TTATTGCCCA
TATAGATTTA CACCTGCAGC TAAAAAAACG ACAACAGGCT GTTGCGTACC CGTTCTTGTA
ACCGGTGTTG TGGTAGCATC AAATCCGATC ATTGTGAGCG GCACAGACAA TACCGATCTG
GATGTTACCG TATATGAAAG CACGTCAAAC TATTTTCAAT GGTATAAAGA TGGTGTGGCT
ACTACAGGCG GAGCAGGCTT AATACATATC AATGTGAATC AGGCGGGTGT TTATTCAGTC
CGTGAAGTTA AAGTTGCCGC AGATCTCAAC AAAGTCAGCT GTTACCAGGA AGCAACGGTA
ACGGTTTCTG AACGTTCCTT ATTTGCACGG GTAAATAATC CGAAAGCGAG TTATTGTGTC
GGAGACAAGG TTACGGTTGA AGCGTATGGA TCAAACATCG GTTCTGTAGC CTGGACTCCG
GCATCACTGG CAACGTCTCC CAATTCAAAA ATCACGGAAG TAACATTAAA CGCTACCGGA
ACATTAAATT TTACAGCTAC AGCTCAGGTG TTCACCGGTC CGTCTATCAT CAACGGTGAC
TTTGAAGCCG GCAATACCGG TTTTACGAGT GACATGACAA ATACTACCGG AACGCCTTCC
AGCGGGCAGT ACCGCATTGA TACCTACGTA ACAGAACAGC AGTCTTACTG GAGTGCTTCT
GCAACACCCT CGCCTGCCGC ACAAATGAAA GGTTCCGGAA GATTTTTATA CTCAGATGGT
TTCCAGACGT ACCAGCCGGG AAGTATCATC TGGAAACAAA CAGTTCCGGG ACTAAGCCAG
AATCAGAATT ATACGTTTTC CATGGATCAT GCAAACATTT CCTGGAATTC AGATCCTTCC
AATACAGCCC GCGTAGCAGA TATTGATACA AAATTTGATA TCTATATCAA CAACGTTAAA
ATTACAACGT TTACAACAGA TGGTCAAGGC CAGTATGCAG GTGTGGGCCG CTGGAAAACC
GATCAGGTGG TTTGGAATTC AGGTACGGCA ACACAGGCAG TTATCGAAAT CAGACAGCAG
GTGAAAGGTG GTACCGGATA TGACTTTGCC ATTGACAATA TTTTATTTGG CGGGCCTGTA
CTGCAAACAG CAACGGTAAG TGTTGGTCCG ATCGCTGATT GTTTCGACGT TATTCCAAGC
CAGAGCGCCT GCGTAGGAGC GAATAAAACA CTAACGGCAA AAGCAATCAA TACCGTTACA
GGAGAAGAAG TAGGGGTAAT TGACCGCTGG GAAGCACCGG TAGGTACGGT AGTAGGTACC
GGTAAAACAA TTACGGTATC GCCTGCCGTT ACAACAACGT ATACCGTGTA TGCACGTTTT
CCTGCATCAA ATTTAATACA GAACAGTGAT TTTGAACTGG GTGCCAATGG GTTTAAATAT
GGTACGGCCA ATGGATTGTA TAACCAGGGA AATTCCCAGG GAAATTTTCA GGTACTGAAA
AATCCTACTA CTACCGGATG CGGTGGATAT TGTGTGAATT TGGGCGACCA TACAACCGGT
ACCGGAAATA TGTTATTTGT GGATCCGCAA ACGGCAGATG GAAATGTGAT TGCCTATGAT
TTCAATGCCA TTGGCGGACA GAGTTATCTG TTTTCGTTAT GGGTGGCGAA TGCCGTTAAT
TTTGCCAGCA ATGCAAATCC ACTTCTTTCC AGCGTAAGTT TCATAGTAAA TGGTCCGGGT
GTTACCAACC AGACAATTGC AAGTATCAAT ACAACAAAAG ACAATGTCTG GAACCAGTTG
AGTACTGTCT GGACACCGCC ATCCAATGGG GCATATACAT TAACCATCCG TGCGAAAGGG
GATGCAACGT TGCAGGCATT GCAACCGGGC AATTCCGGCG GAAATGATTT TGTTATTGAT
GACATCATCC TGGCAGAGCC AACCAGTAAA GTATATTCCA AAACAATTGT TGTTACACCC
TGCGTTACCT GTACACAGCC AACAAGTGTT ACCATTACAA CGCCGGCGGC AGCTACGGTA
ACCATCTGCC AGGGTACCGC ACAAACATTA TCCGGAACGG TTACCGTACC GGCTGCATCA
TCGGCAACCG GCGGATACAG ATATCTATGG ATCAAAATGG GTGCTACTCC TGCAGCCAAT
ACGGTGCTGA CATCCGGCGC AATAACGCCA GCAATCAATA CAGCAACAGC AGTACCTGAT
TATACAGGTA TAACCGGTGC GTTGACGGAT GCAGGTAAAT ATATTTTGCG TGTTGAAGAC
GGCACAGCAG GAAATCCAAC ATGTTTCAGA GACGATACGC TAACCCTTGT TATAAACCCG
ACAACAGTTG CGGGTTCCAT AGCCGCAGCG CAGACGATCT GTACGGGCGG CGACCCGGTA
GCCTTTACCA GCGTAGCAGC TACCGGCGGC AACGGGACAA CATATTCGTA TGTATGGGAA
AAATCGATCA ACGGAGCAGC GTATGCCGAT ATTACACCTG CAGTTACTAC AGCTACTTTT
GATGAAGGCG TATTAACCAA TGCAGGGACA ACAGCCATGA CGGTTGACTA CCGCCGTAAA
GTTACTTCCG GGGCCTGTCC GCAGGTCACC ACAGCCGCTG TCCGTATCAC GGTTAACCCA
GCCATTGTTG CGGGCATAGT TGCGGCCGAC CAGACGATCT GTTCAGGCGG GGATCCGGCA
GCCTTTACGG TAACGGCGAC CCCGACAGGA GGCACAGGCA CGTATACTTA CCAGTGGCAG
AGCGCTTCAG CCCTTGCAGG TACATATACC AATATAGCCT CAGCAACAGG AGCCACCTAC
GATGTTCCAT CGGGCTTAAC AGCAACCACG TATTACAGAA GAGTAGATGC CTCAGGCACC
TGTACAACAG TCAACACCAA TGTTATCACT GTCACGGTTC AGCCGGCTTT AGTTCCGGGT
ACTGTAACAG CCGATCAGAC CATCTGTTAC AATACAGCAC CGGCAGCATT CACAAGCACA
GCAGCTGCCA GCGGCGGCAA CGGTACTAGC TATGCGTATC AGTGGCAGAC CAGCACAACA
GCTGCAGGCG TCTATACAGA TATTGCCGGA GCAACCAATG CAGCATTTAC AGACGCGACC
CTGCTTACAG CAGATAAATA TTACAGAAGA AAGGTTACTT CCGGTACCGT TGCTACCTGT
AATATAGCCT ATACCGCAGC GATCCATATA ACCGTTTCTC CCGATCTTGT TGTTGGGAGT
ATTGGCACCG CACAGACCAT CTGTACAGGT ACAGCTCCTG CAACTCTAAC AAGCATAAGC
CTTCCAACCG GAGGTAAAAC ACCCTATACA TACCAATGGC AATCCAGTCC GGATAACGGA
ACAACTCCTT GGTCTAATAT CGGTTCAGCT ACAAGTGTAG ATTACACTCC TGGCACGTTA
AGTACAGATA TGTACTACAG AAGGTCAGAT ATTTCAGCTG GCGGCTGCGG AACATTATAT
ACAGCAAGCA TAAAAATCAC GGTTGATCCT TTAGTAACAG CAGCTGTTAT TTCATCCGAC
CAGTCAATCT GTTCAGGCGC AGCACCCTCT CAGATCGGCG GCGCGGCAGC AGCAGGGGGT
TCAACTACTG CCACGGCAGG TTATGTATGG GAAGTATCAA CAACCTCAGG GAGCGCGGAC
TTCAGCGCAA TTTCAGGGGC TACATTAAAA GACTATACAC CGGGTACCTT AACAGTTGAT
ACCTGGTACA GAAGAGTTGA TAAGAAGGGT ACATGCGCGG GAGTAGCTTC GAATGCGGTT
AAGATTTCTA TTGTAGCAGT AGCACCAGCT ACCGTATCGT TATCCCGGTT ACCATCTGGC
CCGATCTGCG AAGGTACCAA TGTTACCTTT ACGGCCAGCG TTGGCAACGG CGGCACACCT
GCTTATGTAT GGACATCCTC TGTAACGGGT GCGTTGGCTT CAACCACAGA TACGTATTCA
AGCACAACGC TTGTAGACGG AGAAGTTATC ACCGTTGATA TTACCAGCAG CTTAAGCTGT
GCGAACCCGA AAACAGCGAC AGCGAGTTCT ACGATGGTTG TGAATACAAA AGTAACGCCA
ACGATATCGA TCACAGCAGA CAAGACAACG ATCTGTCCGA GTGAGAGTGT AACCTTCAGC
ATCACAGCCC AGACCAATCA GGGTACAGCT CCTGCCGGCC CAACGTACCA GTGGCAGACC
AATAAGAGCG GTACTTACCA GAATATTTCA GGAGCGACAA ACAGCACATA TATAGCCTCT
TCGGTTACCA ATGGGGAATC GTTCCGTGTA GTAATGACAA CAGGCTTAAC GTGTGTAACG
TCAGCTACCG CCGTCTCCAC ACCGGTAGCC GTTACGGTTA CCCCTGTACC GACCTTATCG
GTAAGCATTG CAGCTGATAA GGCCACGATC TGTTCAGGTA ATGCGGTTCA GTTTACCGCT
ACCGCAACGG GTTCAGGCTC CACACCTGCG CCAACGTATG AGTGGTTCAT CGGAGCGGCA
GGTTCAGAAA CCAGCCAGGG AGCAGGTTCC ACCACGGCGA ACCCGTACAG CACAACATCG
TTAACGACCA CAGCAGCGTT AAGCCCTCAG ACCTACAGCA TTTATGTAAG AGCGACCAGC
AATGCAACCT GCGCGAGCAC CACTCCGGCA CAGTCCGCAG CGGTCACTGT TACGGTAAAT
GCCGGAGTTG GCGCGGGAAC AATCACAACA ACGTTATTAA CGATCTGCAA CAACACCGTT
CCCGGTGCGA TTACTGAAGC AAGCGCTGCC AGCGGAGGCA CTTCCCCGAC CTATACGTGG
GAAGAATCCA TTGACAACGG GGCCTGGGGC CCTGCCACAG GCACTGTAAG CGGTACGGGC
TTTACACCGA GCGGCGCCAA AACAGGCACC AAAGTATCCT ACAGAAGAAT TGTAACCTAT
ACAAGCATCC CGGCTCCATG CAACACAGCC ATGAGCAACA TTATCGACAT CACGGTTAAC
CCTGCTTTAG TGGCCGGCGT TATCCAGGAT GATCAGATAA TCTGTTCAGG ATTGGTTCCG
GCAGCGCTTA CCCAGGTAAG CGCGCCAACA GGCGGTACAG GCAGCTATAC CTACCAGTGG
CAGAGCAGCA CCACAGGCAC AGCCGGTTCG TTCAGCAATA TTGGCGGAGC CACCACATCT
GGCTATGCAC CGGGCGCATT AACGGCAACC ACCTACTACC AGCGCGTGGA AACGTCCGGC
ACATGCGGGA GTGTCACCGG CAATATGGTA ACCATCACCG TATCGACCCC CGAAGTAGTA
ACAGCCCAGA TCAACGATCC GGGTCAGGTA TGCGAGGGTT CAGTGCCGAT GGTGTTTACG
GCCACCACAA CGGGATCCGG TACCTTAACG TATGCCTGGA CACTTGACGG AGCACCGGTA
GGCACCAACA GCAGTACATA CAGCTATAAC CCAACCACAG CATCCGATGC AGGCAAAAAA
GTAAAAGTAG TTGTAACGAC CTCAATCGGC TGTAATGCCG GTCCTGGTAT CTCCAATGAA
GTAGCCCTGA ATATTGTTGT ATCAAGCATG CCTTCGGTAA GCATCACGGG AGCGCCTGCG
GTACAGTGTT CCGGTTTACC GGTCCGCTTT ACGGTAAGCA ATACCACAGC CGGTGGCAAC
AATCCGACCT ACCAGTGGTT CATCGAATCA CAGGCAGGTG TAGCCACCGC AGTAAGCGGG
GCAACCAATA CAAGCTTTAC CAGCACAGGC TTAACTGCCG GGGATAAGGT GTATGTGGAA
CTTACTTCCA ATCTTGGCTG CGCACTGGGT ACCAACCCGC ACGCTTCCAA TAAGATCGCA
CCAGCGATCC TTGCTACACC GGCTCCGGTG ATCAATGAGA CACCGCTTCC GATCTGCAGC
CCGGAAGGGT TTGAGTTCAC CGCTGTAGTA GGAAGTGCAA CGCCTCCAAA TACGCTGCAG
TGGTATAAGG ATGGCGTAGC GATAAGCGGA GCAACCACAA GCATCTATAA AGCCTTTGAA
AGCGGACTTT ATTCGATAGA GGAAAGCAAT GCAGCGTGCG GCACGATCTC CACGGAAGTA
CCGCTTACCG TAATCCAGAC GCCGGTAGCC AATGCGGGTT CAGATATCAC GGTAAAAGAA
GGAGAGCAGG TAACGCTGAA CGGCAGCGGG GGAGTAATCT ACAGCTGGAG CCCGGATACG
GGTCTTGATG ATGCCAGTTC AGCCACTCCG AAGTTAACAG CTGATAAGAC AATCATGTAT
ATCTTAACGG TTCGTGATGC CACAGGCCAG TGCCATGATG ATGATGAAGT AATGGTGTTT
GTGGAGCGTC CGATCAAGGT ACCCAATGTA ATAACAGTAA ACGGGGATGG AGTGAACGAT
ACCTGGGAGA TTGAGAACAT CGAGAGCTTC CCCAATGCCG AGTTCCTGAT CTACAACCGC
TGGGGGAACC TGGTGTGGAA GAGCACAGGG TATCCCAAGG AGTGGGATGC GACCAACTTC
CGCAACGGGG AAGTATTGCC TGACGGTACC TACTTCTACA TCATCGACCT GCACAGCACC
ATCTATACAG AAGCGTACAC CGGGTATATA CAGGTTGTGA AATAA
 
Protein sequence
MKMKKHRGGI SRYLLGIVFI LLSFYSFAQC GTETFTVKDW CENSYAEWTI TNPDPTAKYH 
WYEPVYNAAG TVIVDTLDRN YGENTAGTYF VSPYRYTTPS PTPVTPGWDN RTFWYVKEKP
ATFSLNNPTA ENHAVAPATG YSMNFTSTLE TRINYVTIPF FSYYVDPGRT WYVQVQIGTK
YSAIYYFNST NLTRVTTNVY LLRVPVFIDT PAGSYTMSVV TNPASPTPGT VAIGTNQLDL
AMLNTATTFP INNTAGINIT GSSNAGRSMI YKWETDTYCP YRFTPAAKKT TTGCCVPVLV
TGVVVASNPI IVSGTDNTDL DVTVYESTSN YFQWYKDGVA TTGGAGLIHI NVNQAGVYSV
REVKVAADLN KVSCYQEATV TVSERSLFAR VNNPKASYCV GDKVTVEAYG SNIGSVAWTP
ASLATSPNSK ITEVTLNATG TLNFTATAQV FTGPSIINGD FEAGNTGFTS DMTNTTGTPS
SGQYRIDTYV TEQQSYWSAS ATPSPAAQMK GSGRFLYSDG FQTYQPGSII WKQTVPGLSQ
NQNYTFSMDH ANISWNSDPS NTARVADIDT KFDIYINNVK ITTFTTDGQG QYAGVGRWKT
DQVVWNSGTA TQAVIEIRQQ VKGGTGYDFA IDNILFGGPV LQTATVSVGP IADCFDVIPS
QSACVGANKT LTAKAINTVT GEEVGVIDRW EAPVGTVVGT GKTITVSPAV TTTYTVYARF
PASNLIQNSD FELGANGFKY GTANGLYNQG NSQGNFQVLK NPTTTGCGGY CVNLGDHTTG
TGNMLFVDPQ TADGNVIAYD FNAIGGQSYL FSLWVANAVN FASNANPLLS SVSFIVNGPG
VTNQTIASIN TTKDNVWNQL STVWTPPSNG AYTLTIRAKG DATLQALQPG NSGGNDFVID
DIILAEPTSK VYSKTIVVTP CVTCTQPTSV TITTPAAATV TICQGTAQTL SGTVTVPAAS
SATGGYRYLW IKMGATPAAN TVLTSGAITP AINTATAVPD YTGITGALTD AGKYILRVED
GTAGNPTCFR DDTLTLVINP TTVAGSIAAA QTICTGGDPV AFTSVAATGG NGTTYSYVWE
KSINGAAYAD ITPAVTTATF DEGVLTNAGT TAMTVDYRRK VTSGACPQVT TAAVRITVNP
AIVAGIVAAD QTICSGGDPA AFTVTATPTG GTGTYTYQWQ SASALAGTYT NIASATGATY
DVPSGLTATT YYRRVDASGT CTTVNTNVIT VTVQPALVPG TVTADQTICY NTAPAAFTST
AAASGGNGTS YAYQWQTSTT AAGVYTDIAG ATNAAFTDAT LLTADKYYRR KVTSGTVATC
NIAYTAAIHI TVSPDLVVGS IGTAQTICTG TAPATLTSIS LPTGGKTPYT YQWQSSPDNG
TTPWSNIGSA TSVDYTPGTL STDMYYRRSD ISAGGCGTLY TASIKITVDP LVTAAVISSD
QSICSGAAPS QIGGAAAAGG STTATAGYVW EVSTTSGSAD FSAISGATLK DYTPGTLTVD
TWYRRVDKKG TCAGVASNAV KISIVAVAPA TVSLSRLPSG PICEGTNVTF TASVGNGGTP
AYVWTSSVTG ALASTTDTYS STTLVDGEVI TVDITSSLSC ANPKTATASS TMVVNTKVTP
TISITADKTT ICPSESVTFS ITAQTNQGTA PAGPTYQWQT NKSGTYQNIS GATNSTYIAS
SVTNGESFRV VMTTGLTCVT SATAVSTPVA VTVTPVPTLS VSIAADKATI CSGNAVQFTA
TATGSGSTPA PTYEWFIGAA GSETSQGAGS TTANPYSTTS LTTTAALSPQ TYSIYVRATS
NATCASTTPA QSAAVTVTVN AGVGAGTITT TLLTICNNTV PGAITEASAA SGGTSPTYTW
EESIDNGAWG PATGTVSGTG FTPSGAKTGT KVSYRRIVTY TSIPAPCNTA MSNIIDITVN
PALVAGVIQD DQIICSGLVP AALTQVSAPT GGTGSYTYQW QSSTTGTAGS FSNIGGATTS
GYAPGALTAT TYYQRVETSG TCGSVTGNMV TITVSTPEVV TAQINDPGQV CEGSVPMVFT
ATTTGSGTLT YAWTLDGAPV GTNSSTYSYN PTTASDAGKK VKVVVTTSIG CNAGPGISNE
VALNIVVSSM PSVSITGAPA VQCSGLPVRF TVSNTTAGGN NPTYQWFIES QAGVATAVSG
ATNTSFTSTG LTAGDKVYVE LTSNLGCALG TNPHASNKIA PAILATPAPV INETPLPICS
PEGFEFTAVV GSATPPNTLQ WYKDGVAISG ATTSIYKAFE SGLYSIEESN AACGTISTEV
PLTVIQTPVA NAGSDITVKE GEQVTLNGSG GVIYSWSPDT GLDDASSATP KLTADKTIMY
ILTVRDATGQ CHDDDEVMVF VERPIKVPNV ITVNGDGVND TWEIENIESF PNAEFLIYNR
WGNLVWKSTG YPKEWDATNF RNGEVLPDGT YFYIIDLHST IYTEAYTGYI QVVK