| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_3437 |
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| Symbol | |
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| ID | 4185370 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 3926480 |
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| End bp | 3933745 |
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| Gene Length | 7266 bp |
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| Protein Length | 2421 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638073426 |
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| Product | hypothetical protein |
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| Protein accession | YP_680015 |
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| Protein GI | 110639805 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01451] conserved repeat domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGATTA AATCTGTATC GAAAATGAAA AAAAATACTC TCGGATTAAA AATAATCATT
CAATTAGTAA TAGTTTTTCT TTCTATTCAT ACTAATGCAC AGATTTTAGT TTCCGGTACG
GACTTCGATC CTTCACCAGG AAATGCTTCA AGATTTTATA TTGGATTAGA TGATATAACT
CAAATAGGTT TTCAAAATGG AAGTATAACA TCCACTCCTC CATTAGCTAC CAATGTAAAT
CCCAATATAT TTAATGTTGG GTATTTATAT GCCGTTACAC CAACACCCAT TCGCTTAGAT
AGTACGCGTT ATCAGAACTT TATCCCTGTT GATTATTCAT ATGTATACGC ACCACCAGCC
TCAAGTGGTG GTAATCTTAA CATTTTGCAA TATTCACTTA CAGGTTTAGT TCCTAATTCA
AGTGTTTCCG TTATTGTTGA TTATTGCAGT GCGGTAAAAT CTACGTATGC ATCTTGTACG
GGTCAGCGGA ATGAATTTAA AGCAGGCATT AATTTAGATG CAAGTAACCA ATTGTTTGGT
AATGATGTAA CCCAGATAGG TATGGGTGAA TGCAGAAGTG CAACAATAAC GGGTACTGTA
GATGCTGGAG GAAATATGGT ATTCAGAATG AACAATACCA GATTTGGTTC ATGCCAGGCG
ATGGCTATCA AAAAGATTGC GATAATGGGT TTTCCTCAAC CGGCAATTAT TTCTACTTCA
GGAACAGAAG TTTGTGCAGG TGAGCAGATT ACTGTACAGA CAACATCTAC CTATAATGCA
ACGTATCAAT GGCAGGTGGA TAATGGATCC GGAACATTTA CCAGTATTGC TGGTGCAACA
AACCAGGCAT TGTTATACGA GGTTGGAACA ACACCGGCTA CATATAAATT CAGATGTCTT
GTTACTCCAT TACCTAGCGG AACGGCAATA GCTTCTAATG TGGTTCAGAT AAAATCAATA
ACGTGCTGCC TTGATCCGGT TACAGGTGCC GGAACGTCAC GAAAAACTAT TTATTATGAT
GATTTCGGAA CCCTGGATTT ATCGGATGCT ACTGGAAGGA CCTATAAAGT ATGGGATTAC
ACAGATATAA CAAATCCGAA ACTCGTTACA AAAACGACAA CAACTCCTTT CCGGTGGACA
TTAACTCCTG CTCCTTTGGG AGCAACTTTT AAGGCTACAG GCCCATTACA GGATGGAGAA
TATGCTGTGG CATCTTACCT TACAGCTACA GCTGCAGATG GTGCTTATGC TGGTGCACAA
CTGGATTGGG CAAACCGGGT AACCGGCCCG ACAACTCCGC CAAATGTTTC CTTAGATCAT
TCCGGTACAA AAGCGGGAGG AGCGTTATTT ATAAACTGTC CGCCTAATAC TCAGGGACAG
AAATTGTATA CACGCACCAT TCCTGATTTA TGTTTTGGAA AGCAATTGTA TTTTGAATGC
TGGATTGCAG TATTTACAAA TGGTCCAGCT GGAGGTTGCC CTTCATACTC TCCTGTGGAT
GTAACTATTA AATTAACAGA TGGATCAAAT ACAGCTAATA CATCTTCTGC AAATGCTACT
GCTACAAGAC AGAGCGATGG CGGCGGCGTT TGGGTACGTG TAGCCGGCAA TATAACACTT
GGTGCCGGAA GTACGTCTGT TATTATGGAT GTGATAAATA ATTCAAACCA ATATCTGTGC
GGTAATGACC TTGTTATTGA TGATATCAAA ATTATGGCAT GTGCTCCGCC GCCCTTAGAT
GTGTACTTTG ATATTCCTAC GATATCCACT AAGAAAGATG TGTGTACGGC AGCATTGGAT
CTGAATTCAA AACCAAGCAC TCTTTTAAAA GCGTATTATA ATAATGCTCC GAAGTATTTA
TATCAATGGA CTAAAACACC GGCGGATTAT ACTTCATGGA AAAACCTGGC TGTTCCGCCA
CAATCCGGAG AAGTTTTTAC TATTGCAAAT CCTTCCTTAA ATGCAGCATA TACCGGAACA
GTAAATGGCG ATAAAATTTA TTTCAGAGTA ATCGCCGCTA CAGATGCTGT ATTTACTTCC
AATAATAATT TTACAGCGCC TAAGTATGCG AATGATAATG ATCCGTGTAA AAATTATTCG
GTTTCAAACA TAATCGAGTC TACTGTTAAA TGTCCGAGCT GCACGAAACC ATCTGCAGTA
ACGATCACGA CCCCGTCTAC GGGTACGGTA ACGCTTTGTC AGGGTACGGC TCAGAATTTA
ATCGGCAGAG CAACAGTAAC AGCAGCAGCT CAGAATACAA ACTTCACGTA TTCGTGGATC
AAGGTTTTAC CAACCCCTGT AACTACCCCG GTTGCAGCAA CGGTAATTGC GCTTCCGGCC
AATACCCCTA CGTCTACGCC GGCGTTTGCC TTAACGGGCG CGTTAGCGGA TGCAGGTACC
TATACCTTAC GCGTTGAAGA CGGAAGCGCA GGTAATGCAG CCTGTTATAC AGAGGCGAGT
GTGGTAGTTG TTGTTGACCC TGTAGTAACA GCAGCGACAA TTTCAACGGC ACAGACCATC
TGTTCGGGCA CAGCTCCTGC ACAGATGGGC GGCGCGGTAG CAGCAGGCGG TTCAACAACG
GCCACAGCCA GTTATGTATG GGAAAGTTCA GCAAACGGAA CAAGTGGCTG GACAACTGTT
TCAGGTGCAA CGTTAAAAGA CTATACACCG GGAACACTTA CAGCAGATAC GTATTACAGA
AGAACGGATA AAAAAGGAGC ATGTACAGGT GTTGCATCGA ATGTGATAAA AATCACGGTT
GACCCTGTAG TAACGGCAGC GACAATTTCA ACGGCACAAA CCATCTGTTC GGGCACAGCT
CCAGCCCAGA TCGGCGGTGC TGTAGCAGCG GGCGGTTCAA CAACGGCCAC AGCCAGTTAT
GTATGGGAAA GTTCAGCAAA CGGAACCAGT GGCTGGACAA CTGTTTCAGG TGCTGCGTTA
AAAGACTACA CACCGGGAAC ACTTACCGCA GATACGTATT ACAGAAGAAC GGATAAAAAA
GGTGTATGTA CAGGCGTTGC ATCGAATGTG ATAAAAATCA CGGTTGACCC TGTAGTAACG
GCAGCGACAA TTTCAACGGC ACAGACCATC TGTTCGGGCA CAGCTCCTGC ACAGATCGGC
GGTGCTGTAG CAGCAGGCGG TTCAACAACG GCCACAGCCA GTTATGTATG GGAAAGTTCA
GCAAACGGAA CCAGTGGCTG GACAACTGTT TCAGGTGCTG CGTTAAAAGA TTACACACCG
GGAACACTTA CCGCAACAAC ATATTACAGA AGAACAGATA CAAAAGGCGT TTGTCCTGCC
GCTGTTTCCA ATGTTATTCA GATCACGGTT GACCCTGTAG TAACAGCAGC GACAATTTCA
ACGGCACAGA CCATCTGTTC GGGCACAGCT CCAGCCCAGA TCGGCGGCGC TGTTGCAGCA
GGCGGTTCAA CAACGGCCAC AGCCAGTTAT GTATGGGAAA GTTCAGCAAA CGGAACAAGT
GGCTGGACAA CTGTTTCAGG TGCAACGTTA AAAGACTATA CACCGGGAAC ACTTACAGCA
GATACGTATT ACAGAAGAAC GGATAAAAAA GGAGCATGTA CAGGTGTTGC ATCGAATGTG
ATAAAAATCA CGGTTGACCC TGTAGTAACG GCAGCGACAA TTTCAACGGC ACAAACCATC
TGTTCGGGCA CAGCTCCAGC CCAGATCGGC GGTGCTGTAG CAGCGGGCGG TTCAACAACG
GCCACAGCCA GTTATGTATG GGAAAGTTCA GCAAACGGAA CCAGTGGCTG GACAACTGTT
TCAGGTGCTG CGTTAAAAGA CTACACACCG GGAACACTTA CCGCAGATAC GTATTACAGA
AGAACGGATA AAAAAGGTGT ATGTACAGGC GTTGCATCGA ATGTGATAAA AATCACGGTT
GACCCTGTAG TAACAGCAGC GACAATTTCA ACGGCACAGA CCATCTGTTC GGGCACAGCT
CCTGCACAGA TCGGCGGTGC TGTGGCAGCA GGCGGTTCAA CAACGGCCAC AGCCAGTTAT
GTATGGGAAA GTTCGGCAAA CGGAACCAGT GGCTGGACAA CTGTTTCAGG TGCTGCGTTA
AAAGATTACA CACCGGGAAC ACTTACCGCA ACAACATATT ACAGAAGAAC AGATACAAAA
GGCGTTTGTC CTGCCGCTGT TTCCAATGTT ATTCAGATCA CGGTTGACCC TGTAGTAACA
GCAGCTGTTA TTTCATCCGA CCAGTCAATC TGTTCAGGCG CAGCACCCTC TCAGATCGGC
GGCGCGGCAG CAGCAGGAGG TTCAACTACT GCCACGGCAG GTTATGTATG GGAAGTATCA
ACAACCTCAG CGAGCGCGGG CTTCAGCGCA ATTTCAGGGG CTACATTAAA AGACTATACA
CCGGGTACCT TAACAGTTGA TACCTGGTAC AGAAGAGTTG ATAAGAAAGG TACATGCGCG
GGAGTAGCTT CGAATGCGGT TAAGATTTCT ATTGTAGCAG TAGCACCAGC TACCGTATCG
TTATCCCGGT TACCATCTGG CCCGATCTGC GAAGGTACCA ATGTTACCTT TACGGCCAGC
GTTGGCAACG GCGGCACACC TGCTTATGTA TGGACATCCT CTGTAACGGG TGCGTTGGCT
TCAACCACAG ATACGTATTC AAGCACAACG CTTGTAGACG GAGAAGTTAT CACCGTTGAT
ATTACCAGCA GCTTAAGCTG TGCGAACCCG AAAACAGCGA CAGCGAGTTC TACGATGGTT
GTGAATACAA AAGTAACGCC AACGATATCG ATCACAGCAG ACAAGACAAC GATCTGTCCG
AGTGAGAGTG TAACCTTCAG CATCACAGCC CAGACCAATC AGGGTACAGC TCCTGCCGGC
CCAACGTACC AGTGGCAGAC CAATAAGAGC GGTACTTACC AGAATATTTC AGGAGCGACA
AACAGCACAT ATATAGCCTC TTCGGTTACC AATGGGGAAT CGTTCCGTGT AGTAATGACA
ACAGGCTTAA CGTGTGTAAC GTCAGCTACC GCCGTCTCCA CACCGGTAGC CGTTACGGTT
ACCCCTGTAC CGACCTTATC GGTAAGCATT GCAGCTGATA AGGCCACGAT CTGTTCAGGT
AATGCGGTTC AGTTTACCGC TACCGCAACG GGTTCAGGCT CCACACCTGC GCCAACGTAT
GAGTGGTTCA TCGGAGCGGC AGGTTCAGAA ACCAGCCAGG GAGCAGGTTC CACCACGGCG
AACCCGTACA GCACAACATC GTTAACGACC ACAGCAGCGT TAAGCCCTCA GACCTACAGC
ATTTATGTAA GAGCGACCAG CAATGCAACC TGCGCGAGCA CCACTCCGGC ACAGTCCGCA
GCGGTCACTG TTACGGTAAA TGCCGGAGTT GGCGCGGGAA CAATCACAAC AACGTTATTA
ACGATCTGCA ACAACACCGT TCCCGGTGCG ATTACTGAAG CAAGCGCTGC CAGCGGAGGC
ACTTCCCCGA CCTATACGTG GGAAGAATCC ATTGACAACG GGGCCTGGGG CCCTGCCACA
GGCACTGTAA GCGGTACGGG CTTTACACCG AGCGGCGCCA AAACAGGCAC CAAAGTATCC
TACAGAAGAA TTGTAACCTA TACAAGCATC CCGGCTCCAT GCAACACAGC CATGAGCAAC
ATTATCGACA TCACGGTTAA CCCTGCTTTA GTGGCCGGCG TTATCCAGGA TGATCAGATA
ATCTGTTCAG GATTGGTTCC GGCAGCGCTT ACCCAGGTAA GCGCGCCAAC AGGCGGTACA
GGCAGCTATA CCTACCAGTG GCAGAGCAGC ACCACAGGCA CAGCCGGTTC GTTCAGCAAT
ATTGGCGGAG CCACCACATC TGGCTATGCA CCGGGCGCAT TAACGGCAAC CACCTACTAC
CAGCGCGTGG AAACGTCCGG CACATGCGGG AGTGTCACCG GCAATATGGT AACCATCACC
GTATCGACCC CCGAAGTAGT AACAGCCCAG ATCAACGATC CGGGTCAGGT ATGCGAGGGT
TCAGTGCCGA TGGTGTTTAC GGCCACCACA ACGGGATCCG GTACCTTAAC GTATGCCTGG
ACACTTGACG GAGCACCGGT AGGCACCAAC AGCAGTACAT ACAGCTATAA CCCAACCACA
GCATCCGATG CAGGCAAAAA AGTAAAAGTA GTTGTAACGA CCTCAATCGG CTGTAATGCC
GGTCCTGGTA TCTCCAATGA AGTAGCCCTG AATATTGTTG TATCAAGCAT GCCTTCGGTA
AGCATCACGG GAGCGCCTGC GGTACAGTGT TCCGGTTTAC CGGTCCGCTT TACGGTAAGC
AATACCACAG CCGGTGGCAA CAATCCGACC TACCAGTGGT TCATCGAATC ACAGGCAGGT
GTAGCCACCG CAGTAAGCGG GGCAACCAAT ACAAGCTTTA CCAGCACAGG CTTAACTGCC
GGGGATAAGG TGTATGTGGA ACTTACTTCC AATCTTGGCT GCGCACTGGG TACCAACCCG
CACGCTTCCA ATAAGATCGC ACCAGCGATC CTTGCTACAC CGGCTCCGGT GATCAATGAG
ACACCGCTTC CGATCTGCAG CCCGGAAGGG TTTGAGTTCA CCGCTGTAGT AGGAAGTGCA
ACGCCTCCAA ATACGCTGCA GTGGTATAAG GATGGCGTAG CGATAAGCGG AGCAACCACA
AGCATCTATA AAGCCTTTGA AAGCGGACTT TATTCGATAG AGGAAAGCAA TGCAGCGTGC
GGCACGATCT CCACGGAAGT ACCGCTTACC GTAATCCAGA CGCCGGTAGC CAATGCGGGT
TCAGATATCA CGGTAAAAGA AGGAGAGCAG GTAACGCTGA ACGGCAGCGG GGGAGTAATC
TACAGCTGGA GCCCGGATAC GGGTCTTGAT GATGCCAGTT CAGCCACTCC GAAGTTAACA
GCTGATAAGA CAATCATGTA TATCTTAACG GTTCGTGATG CCACAGGCCA GTGCCATGAT
GATGATGAAG TAATGGTGTT TGTGGAGCGT CCGATCAAGG TACCCAATGT AATAACAGTA
AACGGGGATG GAGTGAACGA TACCTGGGAG ATTGAGAACA TCGAGAGCTT CCCCAATGCC
GAGTTCCTGA TCTACAACCG CTGGGGGAAC CTGGTGTGGA AGAGCACAGG GTATCCCAAG
GAGTGGGATG CGACCAACTT CCGCAACGGG GAAGTATTGC CTGACGGTAC CTACTTCTAC
ATCATCGACC TGCACAGCAC CATCTATACA GAAGCGTACA CCGGGTATAT ACAGGTTGTG
AAATAA
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| Protein sequence | MWIKSVSKMK KNTLGLKIII QLVIVFLSIH TNAQILVSGT DFDPSPGNAS RFYIGLDDIT
QIGFQNGSIT STPPLATNVN PNIFNVGYLY AVTPTPIRLD STRYQNFIPV DYSYVYAPPA
SSGGNLNILQ YSLTGLVPNS SVSVIVDYCS AVKSTYASCT GQRNEFKAGI NLDASNQLFG
NDVTQIGMGE CRSATITGTV DAGGNMVFRM NNTRFGSCQA MAIKKIAIMG FPQPAIISTS
GTEVCAGEQI TVQTTSTYNA TYQWQVDNGS GTFTSIAGAT NQALLYEVGT TPATYKFRCL
VTPLPSGTAI ASNVVQIKSI TCCLDPVTGA GTSRKTIYYD DFGTLDLSDA TGRTYKVWDY
TDITNPKLVT KTTTTPFRWT LTPAPLGATF KATGPLQDGE YAVASYLTAT AADGAYAGAQ
LDWANRVTGP TTPPNVSLDH SGTKAGGALF INCPPNTQGQ KLYTRTIPDL CFGKQLYFEC
WIAVFTNGPA GGCPSYSPVD VTIKLTDGSN TANTSSANAT ATRQSDGGGV WVRVAGNITL
GAGSTSVIMD VINNSNQYLC GNDLVIDDIK IMACAPPPLD VYFDIPTIST KKDVCTAALD
LNSKPSTLLK AYYNNAPKYL YQWTKTPADY TSWKNLAVPP QSGEVFTIAN PSLNAAYTGT
VNGDKIYFRV IAATDAVFTS NNNFTAPKYA NDNDPCKNYS VSNIIESTVK CPSCTKPSAV
TITTPSTGTV TLCQGTAQNL IGRATVTAAA QNTNFTYSWI KVLPTPVTTP VAATVIALPA
NTPTSTPAFA LTGALADAGT YTLRVEDGSA GNAACYTEAS VVVVVDPVVT AATISTAQTI
CSGTAPAQMG GAVAAGGSTT ATASYVWESS ANGTSGWTTV SGATLKDYTP GTLTADTYYR
RTDKKGACTG VASNVIKITV DPVVTAATIS TAQTICSGTA PAQIGGAVAA GGSTTATASY
VWESSANGTS GWTTVSGAAL KDYTPGTLTA DTYYRRTDKK GVCTGVASNV IKITVDPVVT
AATISTAQTI CSGTAPAQIG GAVAAGGSTT ATASYVWESS ANGTSGWTTV SGAALKDYTP
GTLTATTYYR RTDTKGVCPA AVSNVIQITV DPVVTAATIS TAQTICSGTA PAQIGGAVAA
GGSTTATASY VWESSANGTS GWTTVSGATL KDYTPGTLTA DTYYRRTDKK GACTGVASNV
IKITVDPVVT AATISTAQTI CSGTAPAQIG GAVAAGGSTT ATASYVWESS ANGTSGWTTV
SGAALKDYTP GTLTADTYYR RTDKKGVCTG VASNVIKITV DPVVTAATIS TAQTICSGTA
PAQIGGAVAA GGSTTATASY VWESSANGTS GWTTVSGAAL KDYTPGTLTA TTYYRRTDTK
GVCPAAVSNV IQITVDPVVT AAVISSDQSI CSGAAPSQIG GAAAAGGSTT ATAGYVWEVS
TTSASAGFSA ISGATLKDYT PGTLTVDTWY RRVDKKGTCA GVASNAVKIS IVAVAPATVS
LSRLPSGPIC EGTNVTFTAS VGNGGTPAYV WTSSVTGALA STTDTYSSTT LVDGEVITVD
ITSSLSCANP KTATASSTMV VNTKVTPTIS ITADKTTICP SESVTFSITA QTNQGTAPAG
PTYQWQTNKS GTYQNISGAT NSTYIASSVT NGESFRVVMT TGLTCVTSAT AVSTPVAVTV
TPVPTLSVSI AADKATICSG NAVQFTATAT GSGSTPAPTY EWFIGAAGSE TSQGAGSTTA
NPYSTTSLTT TAALSPQTYS IYVRATSNAT CASTTPAQSA AVTVTVNAGV GAGTITTTLL
TICNNTVPGA ITEASAASGG TSPTYTWEES IDNGAWGPAT GTVSGTGFTP SGAKTGTKVS
YRRIVTYTSI PAPCNTAMSN IIDITVNPAL VAGVIQDDQI ICSGLVPAAL TQVSAPTGGT
GSYTYQWQSS TTGTAGSFSN IGGATTSGYA PGALTATTYY QRVETSGTCG SVTGNMVTIT
VSTPEVVTAQ INDPGQVCEG SVPMVFTATT TGSGTLTYAW TLDGAPVGTN SSTYSYNPTT
ASDAGKKVKV VVTTSIGCNA GPGISNEVAL NIVVSSMPSV SITGAPAVQC SGLPVRFTVS
NTTAGGNNPT YQWFIESQAG VATAVSGATN TSFTSTGLTA GDKVYVELTS NLGCALGTNP
HASNKIAPAI LATPAPVINE TPLPICSPEG FEFTAVVGSA TPPNTLQWYK DGVAISGATT
SIYKAFESGL YSIEESNAAC GTISTEVPLT VIQTPVANAG SDITVKEGEQ VTLNGSGGVI
YSWSPDTGLD DASSATPKLT ADKTIMYILT VRDATGQCHD DDEVMVFVER PIKVPNVITV
NGDGVNDTWE IENIESFPNA EFLIYNRWGN LVWKSTGYPK EWDATNFRNG EVLPDGTYFY
IIDLHSTIYT EAYTGYIQVV K
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