Gene CHU_3422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3422 
SymbolinfB 
ID4186295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3900583 
End bp3903609 
Gene Length3027 bp 
Protein Length1008 aa 
Translation table11 
GC content45% 
IMG OID638073412 
Producttranslation initiation factor IF-2 
Protein accessionYP_680001 
Protein GI110639791 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0532] Translation initiation factor 2 (IF-2; GTPase) 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00487] translation initiation factor IF-2 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAAG AAAAAATGAT GCGGCTAAGC CAAGTGGCGA AAAAGTTGAA TGTCGGAACC 
TCGACAATCA TCGATCACCT TTCTGCCAAA GGCTACGATA TTGAGAACAA CCCCAATGCC
AAAATTACGG TTGACATGTA CGCATTTCTT TCAAAGGAAT ATGAGTCATC TGCACAGGTA
AAAAAAGAGG CTGAAAGCCT TACCATTGGC AAAAAACACA TGGGTGATGT TGTTATCGAT
GCCGATCAAG TAAATGTTGC ACCCGAACAC GACGAAGAGG ATGAAGTTCG CATCATCAAC
AATAGTCCTG CTGAAGCGGT AGTTCCGGAA GTGCCGGCTG TTACTGCTCA AGAAGCACCT
AAAACTGCAC CAACTGCAGA GTCTCCGGAA GATGTTAAAG GAAACGTAAC GCTTCAGGGC
TTAAAGGTAT TGGGCAAAAT TGATTTAGGC ACAGCGGATA AAGACTCCAA AAAATCAGCG
AAAAATACGA AGCCTGTAGA AAAAGTTGCA GCAGAAAAAC CAATTGAGAA GGCGAAGCCT
GAAACTGTTG CACCTCCTGT TGAACCGAAG CCAGAGCCAA AACAAGAAAC GCCGAAAACC
GAACAGCCGG TTAAAAAAGA GACGCCTAAA GCGGAAACGC AGAAGCCTCC TGTTGCCGAT
AAACCTGCTG AAAAAACACC AGTTGTTGAA GAGCCTGCGG CACCTGTTGC AGACGTTCCA
GTGCAAGTTG TTCAGGCACA TGCTGACAAA CTGCAGGGTT TAACTGTACT TGGTAAAATT
CAACTTCCGG ATAAAAAGAA AGAACCAACA CGTGTGGCTT CTTCGGATGA AGTTGTAGAT
AAAAATAAAA ATAAGCGTAA GCGCAAACGT CTTAACGACG GACCCAATAA ACCTGCCGGA
GCTAATCCGA ACGGACCAAG ACCAGCTGGC AGCAATCCAA ACGGGCCAAG ACCGCAAGGT
ACTAATCCGA ACGGACCGAG ACCACAGGGC CAGGGTGGTA ATCCGAACGG GCCAAGACCA
GCCGGCGGAC CAAATCGTCC GGGTGTTCCG AACCGTCCTA ACAGCAACGG ACCAAAACCT
ACGTTAACAA AAGCAAGCGA AAAAGGTGAA GTAACCGGAA AACAGATTCA GGATAAAATT
AAAGCTACCA TGGCAAAATT GTCTGGTGGC GGTACAAAAT CCGGTCCGGT TAACAGAGCC
AAATACCGTA AAGATAAACG TTCTGCAATG GCAGATGCTG AAGAAGAACG TTTAATGGCG
GAGCAGGAAG ATGCTAAATC GTTAAAAGTA GCTGAATTTA TTTCTGCAAG TGATTTAGCA
TCTCTTATGG ATGTGAGCAT CAATGAAGTA ATTTCTAAAT GTATGGCAAT GGGTATGTTT
GTATCCATCA ACCAGCGTTT GGATGCTGAA GCGATCACCA TCATTGCAGA TGAGTTTGGT
TATGATGTAA ACTTCCAGAC TACAGGTGAA GAAGACGATG TTACAGATGT AGATCAGGAT
GATCCTGCAT CCTTGATTGA TCGTGCACCG ATTGTAACCA TCATGGGTCA CGTCGATCAC
GGTAAAACTT CTTTGCTTGA TTATATCCGT AAATCAAAAG TTGTAGCGGG TGAAGCCGGC
GGTATTACGC AGCACATTGG TGCATACAAT GTAATGACCG ATTCAGGTAA ACCGATTACA
TTCTTAGATA CTCCGGGTCA CGAAGCCTTT ACAGCGATGC GTGCCCGTGG TGCCAAGATC
ACGGATATTG TAATTATTGT GGTAGCTGCC GATGACTCGG TGATGCCTCA GACAAAAGAA
GCAATCAACC ACGCGCGTGT AGCAGGTGTA CCGATTATTA TTGCAATCAA TAAAATTGAT
AAGCCAGCTG CCAACCCGGA TAAGATTAAA GAAGAACTTT CGAAAGAAAA TATTCTTGTT
GAAGACTGGG GCGGTAAATA CCAGTGCCAG GCAATTTCTG CAAAAGCAGG AACCGGTATC
AGCGAATTGC TTGATAAAGT ATTGCTTGAA GCAGAGATGC TTGAATTAAA AGCAAACCCG
GATAAACGTG CCATTGGTGC GGTTATCGAA GCGTCTCTTG ATAAAGGCAG AGGTTATGTA
ACCAACGTAC TGGTTGAAGC AGGTACCTTA CGTATTGGTG ATATCATCTT AGCGGGTGCA
CACTTCGGCC GTGTGAAAGC AATGGTTGAC CATACCGGTA AAAAATTAAA AGAAGCAGGA
CCAGCCATGC CATTACAGGT ATTGGGTCTT AACGGTGCAC CACAGGCGGG TGACAAGTTC
CAGGTAATGG AGACAGAACG TGAAGCGAGA GAGATCTCTT CTAAACGTGA GCAGTTATTG
CGTGAGCAAA GCATCCGTAC CAAGAAACAC ATTACATTGG ATGAAATCGG CCGTCGTTTG
GCGATCGGTA ACTTCAAAGA ACTTAACATC ATCGTTAAAG CCGATGTGGA TGGTTCTGTG
GAAGCCTTGT CCGATTCATT ATTGAAATTA TCTACCGAAG AAATTCAGAT CCGTATCCTG
CACAAAGGTG TTGGGCAGAT CTCTGAATCA GATATCTTAC TGGCATCTGC ATCGGATGCG
ATCATTGTTG CCTTCCAGGT ACGTCCTTCT ACAAGTGCAC GTAAACTTGC CGAGCAGGAA
CAGATTGAGA TCCGTATGTA CTCAATCATC TACGACGCGA TCAACGAAGT GAAAGATGCG
ATGGAAGGTA TGCTTGAGCC GAAAATGGAA GAGGTTGTAC TTGGTACAAT CGATGTCCGT
GACGTATTCA AGATCACCAA AGTGGGTACC GTTGCCGGGG CATATGTATC TGAAGGTATT
GTTAAACGTA ATAACCAGGT TCGTTTGATC CGTGATGGTA TTGTTATGTT CACAGGTACA
ATCAGTGCAT TGAAACGTTT CAAAGACGAT GTTTCTGAAG TGAAAACAAG TTATGAATGC
GGTATCAGCT TAAAAGGATA CAACGACATT CAGATCGGTG ACCAGATCGA AGCATTCGAA
CAGAAAGAAG TTAAACGTAC ACTGTAG
 
Protein sequence
MAEEKMMRLS QVAKKLNVGT STIIDHLSAK GYDIENNPNA KITVDMYAFL SKEYESSAQV 
KKEAESLTIG KKHMGDVVID ADQVNVAPEH DEEDEVRIIN NSPAEAVVPE VPAVTAQEAP
KTAPTAESPE DVKGNVTLQG LKVLGKIDLG TADKDSKKSA KNTKPVEKVA AEKPIEKAKP
ETVAPPVEPK PEPKQETPKT EQPVKKETPK AETQKPPVAD KPAEKTPVVE EPAAPVADVP
VQVVQAHADK LQGLTVLGKI QLPDKKKEPT RVASSDEVVD KNKNKRKRKR LNDGPNKPAG
ANPNGPRPAG SNPNGPRPQG TNPNGPRPQG QGGNPNGPRP AGGPNRPGVP NRPNSNGPKP
TLTKASEKGE VTGKQIQDKI KATMAKLSGG GTKSGPVNRA KYRKDKRSAM ADAEEERLMA
EQEDAKSLKV AEFISASDLA SLMDVSINEV ISKCMAMGMF VSINQRLDAE AITIIADEFG
YDVNFQTTGE EDDVTDVDQD DPASLIDRAP IVTIMGHVDH GKTSLLDYIR KSKVVAGEAG
GITQHIGAYN VMTDSGKPIT FLDTPGHEAF TAMRARGAKI TDIVIIVVAA DDSVMPQTKE
AINHARVAGV PIIIAINKID KPAANPDKIK EELSKENILV EDWGGKYQCQ AISAKAGTGI
SELLDKVLLE AEMLELKANP DKRAIGAVIE ASLDKGRGYV TNVLVEAGTL RIGDIILAGA
HFGRVKAMVD HTGKKLKEAG PAMPLQVLGL NGAPQAGDKF QVMETEREAR EISSKREQLL
REQSIRTKKH ITLDEIGRRL AIGNFKELNI IVKADVDGSV EALSDSLLKL STEEIQIRIL
HKGVGQISES DILLASASDA IIVAFQVRPS TSARKLAEQE QIEIRMYSII YDAINEVKDA
MEGMLEPKME EVVLGTIDVR DVFKITKVGT VAGAYVSEGI VKRNNQVRLI RDGIVMFTGT
ISALKRFKDD VSEVKTSYEC GISLKGYNDI QIGDQIEAFE QKEVKRTL