Gene CHU_3416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3416 
Symbol 
ID4186289 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3894101 
End bp3894979 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content40% 
IMG OID638073406 
Productcarboxypeptidase 
Protein accessionYP_679995 
Protein GI110639785 
COG category[V] Defense mechanisms 
COG ID[COG1619] Uncharacterized proteins, homologs of microcin C7 resistance protein MccF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGATT CATCCGTTAT TCATGTTGTT TCCCCCGCTG GCGCGGTAAA TAAAATAAAC 
CTTGCAGCAG GCATAAGCTA TGTATCGGGT TTTGATTTTT TAATTAAAGC CGGCAAATCC
ATCTTTCAAA AAAAAGGATA TTTTGCAGGT ACTGATACAG ATCGTCAATA TGATTTGCAA
CTTGCCTTAG ATGACCCCAA TGCATTGGCT ATCTGGGTGG CACGCGGCGG ATATGGCACC
ACACGCATCA TAGATACGAT CAGCTGGAAA AAGTTTTTTA AAAAGCCTTC CTGGATCATT
GGCTTTAGCG ATATCACAGC ATTTCACATT CATTTATCCA ATCATAACAT ACCAAGCATT
CACGGACCAA TGGTGGCGCA GGCTGCAGAT GACAACCACA AAGAAGCGGT TGACTTAGTA
ACTGCTATTT TAAAAAATGA TTTTCCTGAT TACCTGCTTC GTTCAAATAA AAACAATAGA
CCCGGCAAAG CTAAAGCACC CATCACAGGC GGTAATTTAA CGCTTATCTG TTCAACCATA
GGTACAGCTA CGGAAATCAT TACCGATAAT AAAATTTTAT TTATTGAAGA AGTTGGTGAA
GCTGCATACA GAGTAGATCG CATGATGGTT CAACTCAAAC GTTCAGGCAA GCTTAAAAAG
CTTAAAGGGC TAATCGTTGG TCATATGACA GACATTACAC ACGAAGATGA ATTCGGGCAA
TCTGTTACAG ATATTATTCT TTCGCATACA AAAGAGTACA CATTTCCCAT ATGCTTTGAT
TTTCCTGCCG GGCACGAAGC CCCCAATATG CCAGTCATAT TGGGATTGAA AAGTGAGTTG
ATTGTAGCTA AATCTGAAAT TACACTCAGG TACTTATAA
 
Protein sequence
MKDSSVIHVV SPAGAVNKIN LAAGISYVSG FDFLIKAGKS IFQKKGYFAG TDTDRQYDLQ 
LALDDPNALA IWVARGGYGT TRIIDTISWK KFFKKPSWII GFSDITAFHI HLSNHNIPSI
HGPMVAQAAD DNHKEAVDLV TAILKNDFPD YLLRSNKNNR PGKAKAPITG GNLTLICSTI
GTATEIITDN KILFIEEVGE AAYRVDRMMV QLKRSGKLKK LKGLIVGHMT DITHEDEFGQ
SVTDIILSHT KEYTFPICFD FPAGHEAPNM PVILGLKSEL IVAKSEITLR YL