| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_3412 |
|---|
| Symbol | yaeT |
|---|
| ID | 4186285 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | + |
|---|
| Start bp | 3889652 |
|---|
| End bp | 3892198 |
|---|
| Gene Length | 2547 bp |
|---|
| Protein Length | 848 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 638073402 |
|---|
| Product | outer membrane protein; surface antigen |
|---|
| Protein accession | YP_679991 |
|---|
| Protein GI | 110639781 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
|---|
| TIGRFAM ID | [TIGR03303] outer membrane protein assembly complex, YaeT protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGA TTCTATACCT CATTTTTTTA TTACTCGTAA TAACTTTTAC AGCAAATAGC
CAGTGGAGAT ATGGTGCTAA AAGAAACAAC GTAGATATAA ATTACGAGAC CCCGCAAGAC
TTTTATATCG GAGGAATTTC AGTCTCCGGT GTTCAGTTTT TAGATCCTGA AGCAATTATT
GCATTGACTG GTTTAAAAAT CGGCGATAAG GTTACTATTC CCGGAGATGA AATTACAAAT
GCCATTAAAA AGCTGTGGGA ACAAGGGCTG ATCGGCGATG TAGAAGTTGT AGTAAAAAAA
ATTGAGGTTA AAAATATTTA CCTTGAATTC ATTATCAAAG AACGTCCCAG ACTTACAAAG
TTTATTTTTG ACGGACCAAC AAAATCAGAA CGTGAAGATT TAGAAGACAA AATTGATTTG
TCAAGAGGTA GAATTGTAAA TGATGCCTTA ATAAAGAATG CAAAAAATAA AATCCGTGAA
TTCTATTTAG AAAAAGGATA CCTGAATGTA GCTGTTGATA TCATACAGAC AAAGGATACC
ATTTTAGAGA ACAACGTTAT TTTACGGGTT GTTGTTGACA AAAAACATAA GGTCAGGATC
AAAAAAGTAA TCATTACCGG TAATGAGTCG TTTGAGTCTG CAACTCTTCA ATCCAAAATG
AAGAAAACCA AAGGACAGAA ATTAACCAAT GTCTGGACGG GATCAAAAGT CATAAATAAA
AACTATGTAG CTGACAAAGC AGCATTGATT GAATACTACA ACTCTAAAGG TTATCGCGAT
GCACGCATTG TCAGTGATTC TATAATCCCT GTAAAAAACG ATCACGTAAA TATTACCATT
CAGCTTGAAG AAGGTAATAA GTATTATTTC CGCAACATTA CCTGGAAAGG GAATTATATT
TATAGTACCG CACAGCTTCA GGAAATTTTA GCGATTAAAA AAGGTGATGT ATACAACAAT
GATCTGTTAC AGCGCAAGCT TAGCTTCAAT CCTGCCGGGC CAGACATCAG TTCGCTTTAT
TTAGATAATG GATATTTATT CTTTAGCATA GACCCGGTTG AAATTTTAAT TGAAGGCGAC
TCTATTGATA TCGAAATGCG TATCTACGAA GGTGAGCAGG CAATCGTGAA TCATATAGAA
GTGGATGGTA ATACAAAAAC ACACGATCAT GTGATTCTTC GTGAAGTGAG AACGTACCCG
GGTGATAAAT TCAGCCGTGC CGATCTGATC CGTACACAAA GAGAATTGGG GGCATTAAAT
TATTTCGATA ATGAGAAATT AGGTATGAAC CCTGTTCCAA ATCAGGCTAC AGGTAAAGTT
GATATTGGTT ATACTGTAGT TGAAAAACCA AATGACCAGG TAGAATTATC CGGTGGTTGG
GGTGGTTATT ATGGATTTGT AGGAACGGTT GGTTTGGTAT TCAACAATTT CTCTCTTAGA
AATATCAAAC ATCCTAAGAC CTGGAGCCCG CTACCTGCCG GTGATGGACA AAGACTTGCC
TTTAGAGTGC AAGCCAATGG AAGAACATAC CAGACCTATA CAATTTCATT TACAGAACCT
TGGTTAGGAG GTAAAAAACC AACGTCCTTA TCTGTAAGTT TACAGCACTC TGTGCAGAGC
CAGCTTATTT ATAATGGTAC AAGAAGTGTT AAATCAGGTT CTTTACAGGT AAGCGGATTA
ACGGTGAGTG TAGGTAAACG TTTGAAATGG CCGGATGATT TCTTTACAAT CAACCATACG
TTCTCTTTAT TACGCTACAC GCTTAATAAT TATCAAAGCA GTTCTTCTAC AGCAGTGATC
GGTTATACAA CTGGTTATTC CAATAACTTA TCTTATAACT TAACGGTTTC AAGAAATAGC
ATTGATAATT TCCAGTTCCC GTCATCGGGT GCAAACATGG CATTCAGCAT GACTTTCACG
CCTCCGTATT CTTATTTCAA CAAACTGAAT TATGATGATC CGGACTTAGA AGCGTCTCAA
CGTTATAAGT GGTTAGAATA TCAAAAATAT GGTTTTGATG CTTCGTGGTT TACTACGTTA
TGGCAGCATA GAAAGAAATC AAAACATAAA ATTGTATTCA ACGCACGTTT CCATGGTGGT
GTTATCGCAG CGTACCAGCC TGGCGTTGGT GTAGGTCCGT TCGAACGTTA TATCATGGGT
GGTGATGGTC TTTCCGGATA CAACTTCTTA TTGGGTTCAG ACATCATTGG TTTAAGAGGT
TATGGAAACA ATACCATCAA GCCTACGCAA TCAGGTGGTG TTGCTTTTGA TAAATTTGTT
GCTGAAGTGC GTTATCCGAT CTCTAACAGT CCGTCTTTCT CTATTTTCGT ATTAACCTTC
TTTGAAGCAG GTAATGCATG GGGCGATATT CATGATGTAA ATCCATTTAA TGTATATCGT
TCTGCAGGTG TGGGTGCTAG AATATTTATG CCGGCATTTG GTTTGATAGG TATTGACTGG
GGTGTACCAT TTGATCAGGT TCCTGGTTAT CCAAATCCTA CCTACAAACC GCACGTTACG
TTCACAATTG GTCAACAAAT CCGTTAG
|
|---|
| Protein sequence | MKKILYLIFL LLVITFTANS QWRYGAKRNN VDINYETPQD FYIGGISVSG VQFLDPEAII
ALTGLKIGDK VTIPGDEITN AIKKLWEQGL IGDVEVVVKK IEVKNIYLEF IIKERPRLTK
FIFDGPTKSE REDLEDKIDL SRGRIVNDAL IKNAKNKIRE FYLEKGYLNV AVDIIQTKDT
ILENNVILRV VVDKKHKVRI KKVIITGNES FESATLQSKM KKTKGQKLTN VWTGSKVINK
NYVADKAALI EYYNSKGYRD ARIVSDSIIP VKNDHVNITI QLEEGNKYYF RNITWKGNYI
YSTAQLQEIL AIKKGDVYNN DLLQRKLSFN PAGPDISSLY LDNGYLFFSI DPVEILIEGD
SIDIEMRIYE GEQAIVNHIE VDGNTKTHDH VILREVRTYP GDKFSRADLI RTQRELGALN
YFDNEKLGMN PVPNQATGKV DIGYTVVEKP NDQVELSGGW GGYYGFVGTV GLVFNNFSLR
NIKHPKTWSP LPAGDGQRLA FRVQANGRTY QTYTISFTEP WLGGKKPTSL SVSLQHSVQS
QLIYNGTRSV KSGSLQVSGL TVSVGKRLKW PDDFFTINHT FSLLRYTLNN YQSSSSTAVI
GYTTGYSNNL SYNLTVSRNS IDNFQFPSSG ANMAFSMTFT PPYSYFNKLN YDDPDLEASQ
RYKWLEYQKY GFDASWFTTL WQHRKKSKHK IVFNARFHGG VIAAYQPGVG VGPFERYIMG
GDGLSGYNFL LGSDIIGLRG YGNNTIKPTQ SGGVAFDKFV AEVRYPISNS PSFSIFVLTF
FEAGNAWGDI HDVNPFNVYR SAGVGARIFM PAFGLIGIDW GVPFDQVPGY PNPTYKPHVT
FTIGQQIR
|
|---|
| |