| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_3411 |
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| Symbol | uppS |
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| ID | 4186284 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 3888869 |
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| End bp | 3889651 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 638073401 |
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| Product | undecaprenyl pyrophosphate synthetase (di-trans,poly-cis-decaprenylcistransferase) |
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| Protein accession | YP_679990 |
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| Protein GI | 110639780 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
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| TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGTACATTT ACCCTTCATT AGAATTCATG GAATACCAAT CACAAATAGA TTCATCGAAA
TTGCCTGAAC ACATTGCCAT TATTATGGAT GGTAATGGAC GCTGGGCAAA GAAACAAGGA
TTACTTAATC GTATTTTTGG TCACAAAAGT GCTATCACTT CTGTTAGAGA AGCGACAGAA
ACATGTGCCC AATTAGGTGT TAAGTATCTA ACGTTGTATG CTTTTTCAAC GGAAAATTGG
AATCGTCCGA AAGAGGAAGT AAATGCGCTG ATGGAACTCT TAGTATCTAC CATTAAAAGT
GAAACACCAA CACTTAATAA AAATAAGATT CGGTTAAATG CTATAGGTGA TTTGGCTTCT
TTACCCCTCT CCTGCCAAAA AGAATTATCC GAAACTATCG AACAAACGAA ACACAATACC
GGCGTTGTAT TAACGTTAGC ATTGAGCTAT AGCGGCAGAT GGGAAATTCT TGAAGCAATA
AAGAAATTAA CTGCATCTGT AAAAGATCAA TCGTTTGATA TTAATTCTTT GAACGAAAAT
ACATTCAGAC AATTCCTTTC TGATAAAACG TTACCCGATC CGGAGCTGCT GATACGCACG
AGTGGAGAAT TCAGAGTGAG CAATTTCCTG TTGTGGCAGA TTGCTTATAC TGAGATTCAT
ATTACGGATG TGCTTTGGCC GGATTTCAGA AAAAATGATT TATACAAAGC TATTGTAGAC
TTCCAGAAAC GCGAACGTCG TTTTGGAAAA ATTAGTGAAC AATTGGACGG AGCAAAAGCT
TAA
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| Protein sequence | MYIYPSLEFM EYQSQIDSSK LPEHIAIIMD GNGRWAKKQG LLNRIFGHKS AITSVREATE
TCAQLGVKYL TLYAFSTENW NRPKEEVNAL MELLVSTIKS ETPTLNKNKI RLNAIGDLAS
LPLSCQKELS ETIEQTKHNT GVVLTLALSY SGRWEILEAI KKLTASVKDQ SFDINSLNEN
TFRQFLSDKT LPDPELLIRT SGEFRVSNFL LWQIAYTEIH ITDVLWPDFR KNDLYKAIVD
FQKRERRFGK ISEQLDGAKA
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