Gene CHU_3408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3408 
SymbolppnK 
ID4186523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3886195 
End bp3887073 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content38% 
IMG OID638073398 
Productinorganic polyphosphate/ATP-NAD kinase 
Protein accessionYP_679987 
Protein GI110639777 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0061] Predicted sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.828222 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTTTG CATTGCATGG CAGACCATTC AAAGAGGATA ACATCCCTTA TGTACAGCAC 
TTGTTGTATT ATCTTCAGAA AAAAGAAATA CAGTTTCTGA TCAATGAATC GTTTGTTGAT
TATTTGGTTC AATGCAACAT TCTTCTGCCT TCTTTCTTTA CTACATTTAC AAACAAAACA
GACCTGGGCA AACCAGACCT GATGCTCAGC ATAGGCGGTG ACGGAACGCT ATTGGAATCG
GCAACCTTTA TCGGTGATCA GAATATTCCA TTGGTTGGTA TCAATACTGG GCGCCTGGGT
TTTCTGGCAA CAACACCACG TGAAGAACTG GAAGGCTCCG TAGATGAATT AATCTCCGGC
TCCTATAAGC TTTCTGAAAG AACATTGATC AAACTCATTT CTGATGAGAA ACTTTTCGGC
GATTTAAATT TTGCCATGAA TGAATTTGCC TTAACAAAAA GAGATTCTTC TTCTATGATC
ACGGTGCATA CCTACATTGA TGGTGAGTTT CTCAATTCGT ACTGGGCGGA TGGTTTATTA
GTATCTACCC CAACAGGTTC TACGGGTTAC TCATTAAGTT GCGGAGGGCC TTTAGTGCAT
CCCAAAACAG AGAATTTCAT TATAACACCA ATAAGTCCCC ATAACCTGAA TGTACGGCCA
ATGATTGTGC CCGACAGTTG TCATATTTCT TTCGAAATTG AAGGCCGAAA CCAAAATTTC
CTTATTTCGT TAGATTCAAG AGCTGAAATT GTTTCTTCCA ATATTAAATT ATCCGTAAAA
AAAGAGGACT TTAAGATTCA ACTAGTAGAA TTAAAAAACT ATAACTATTA CAAAACACTT
CGAAGCAAAC TAAATTGGGG ATTGGATGCT CGAAATTAA
 
Protein sequence
MIFALHGRPF KEDNIPYVQH LLYYLQKKEI QFLINESFVD YLVQCNILLP SFFTTFTNKT 
DLGKPDLMLS IGGDGTLLES ATFIGDQNIP LVGINTGRLG FLATTPREEL EGSVDELISG
SYKLSERTLI KLISDEKLFG DLNFAMNEFA LTKRDSSSMI TVHTYIDGEF LNSYWADGLL
VSTPTGSTGY SLSCGGPLVH PKTENFIITP ISPHNLNVRP MIVPDSCHIS FEIEGRNQNF
LISLDSRAEI VSSNIKLSVK KEDFKIQLVE LKNYNYYKTL RSKLNWGLDA RN