Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_3369 |
Symbol | |
ID | 4185064 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 3850764 |
End bp | 3851990 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638073359 |
Product | hypothetical protein |
Protein accession | YP_679948 |
Protein GI | 110639738 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0686] Alanine dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0502916 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.14183 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTAAAT TAAAAATCGG TATTATTCGC GAAGGTAAAG TACCATCTGA CAGACGGGTA CCCTTATTGC CTGCTCAGTG TGTAGAGATT ATGCAGCAAT ACCCGCATGT TGAGATTTTT GTTCAGCCAA GCGATATCCG TTGTATTTCA AATAAAGAAT ATGTATCTGC CGGTATACCC ATCAGAGAAG ATTTAAGTTC CTGCGATATA CTTTTAGGTA TAAAAGAAGT GCCGATCTAT CAGTTGATGG CGGATAAAAC GTATTTGTTT TTTTCTCATA CGATTAAATT ACAGCCTCAC AATCAAAAAT TGCTGCAGTC TGTTTTAGAA AAACGCATTA CGCTGATTGA TTATGAAGCG TTGCGAGACA AAGAGAATAA ACGTGTTATT GCCTTTGGAT ATTACGCGGG AATAGTTGGT GCATACAATG CTTTTTTACT TACAGGTAAA AAGTATAACT TATTTGATTT GAAGCCAGCT CATAAATGTT ATGATATCAA TGAACTGATA GCTGAATTAA AAAAAGTTGT TTTGCCGCCC TTGCGGTTTG TGTTAACAGG AGCTGGCAGA GTGGGAAACG GAGCAGAACT GATGTTGAAA GAAATGGGAA TACAAAAAAT TTCTCCTCAG GATTTTCTTA CTAAAACATA TAAGCATCCC GTTTACACAC AGATTATTTC AGCAGATTAT AACAGGCTAC CTTCTGCAAA TCAATCGATC AATATCTGGA ACACCGAACA TTTTCACGAA CATCCGGAAA TGTATCAATC GAATTTCATG CGTTTCGCAT CTGTAACAGA TGTGCTTATT GCCGGTGCTT ATTGGGATCA GCGCGCACCC AAATTGTTTA CAACAGAAGA TATTAAACGA TCTGATTTTT CAATCCGTTT AATTGCAGAT ATTACCTGTG ATATTAACGG ATCCATTCCA ACTACGGTGA AGTCAACAAA CATCTACGAT CCGGCATATG ATTTCAATCC GTTTACAAAA GACATTGAAG CACCCTTTTC AGATCCGAGA AATATTACAG TGATGGCGAT AGATAATCTT CCCTGCGAAA TACCACGCAG TGCCTCAGAA GATTTTGGAA ACCAATTGAT CAAAAATGTA TTACCCGATT TGCTTACCAA GCCTTACGGA GACCTGATAC AGCGCTGTGC ACTTACAGTT AAAGGAACGC TGGGTCCGCA TTTTAGTTAT TTAAAGGAAT ATTCAGAAGG GAAGTAA
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Protein sequence | MTKLKIGIIR EGKVPSDRRV PLLPAQCVEI MQQYPHVEIF VQPSDIRCIS NKEYVSAGIP IREDLSSCDI LLGIKEVPIY QLMADKTYLF FSHTIKLQPH NQKLLQSVLE KRITLIDYEA LRDKENKRVI AFGYYAGIVG AYNAFLLTGK KYNLFDLKPA HKCYDINELI AELKKVVLPP LRFVLTGAGR VGNGAELMLK EMGIQKISPQ DFLTKTYKHP VYTQIISADY NRLPSANQSI NIWNTEHFHE HPEMYQSNFM RFASVTDVLI AGAYWDQRAP KLFTTEDIKR SDFSIRLIAD ITCDINGSIP TTVKSTNIYD PAYDFNPFTK DIEAPFSDPR NITVMAIDNL PCEIPRSASE DFGNQLIKNV LPDLLTKPYG DLIQRCALTV KGTLGPHFSY LKEYSEGK
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