Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_3364 |
Symbol | |
ID | 4185059 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 3846044 |
End bp | 3847741 |
Gene Length | 1698 bp |
Protein Length | 565 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638073354 |
Product | hypothetical protein |
Protein accession | YP_679943 |
Protein GI | 110639733 |
COG category | [S] Function unknown |
COG ID | [COG4102] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.752802 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0803791 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAGAA GAGATTTTTT AACAAAACTC CCTGCACTGG CATTGCCGTT TGTAATCAAT GGTACATACT TCAACATACT GGCAGATACA TTGTCGCCCT TACAGCGTCT GGCAGCTAAC TGCCCCAACG ACCGGGTACT GATTATTTTA CAGCTGCATG GCGGTAATGA TGGTATCAAT ATGCTGTTAC CTGTTTCTGA CTATGACCGC TATTATAATG TCCGCGCCAA CATTGCTATT CCGGATAAAG GCGCGCGGGC TTTTATCCGA TTGGATAGTA CGCTTGCCAA TACAGACCAG ATTGGCCTGC ACCCGGATAT GGTTGGCGTG AAAAGTATGT ATGATCAGGG TCTGGTACGC ATGATCCAGG GTGTATCGTA TGAGAATCAC AACCAATCAC ACTTCAGAGG CCGGGATATA TTATTTATGG GTGGCGGCTC CTCTGATTAT TTAACATCCG GCTGGGCAGG CAGGTATTTA AAAAATAATT ACGCGCCCGA TGTGTATCCT GCTGATTTTC CGAATGCAAA CATGCCGGAT CCATTGGCAT TGGAGTTCAA TGATGATCTC TCGCTTGTGT TCCATCAGGA CGATAATATC CCAACATCCA TAGCGATAGA TGACCCGGAA TCTTTTTTTG ATCTGGTTGA TACCCTGCCT GGATACAATG ATAAGCCGGG GATAGATGCA CGCGGTATCC CGCCAGCGTC TGTAGCTAAT TCTCCGTATG GAAAAGAAAT GAACTGGATT CTTAATCTGG AAGAAAAATC AGATGAATAC CACAGCCGCA TTCTTCAGGT ATACAATAAA GGAAAAGCAA CAGACCCGAA TATTTCGTAT CCGGTTTCTT ATCCGCTCAA CGCGCCGAAA CAACGTGTTA AAAATCCGCT TTCAGCAAAA TTAAAAATTA TTGCCAATCT GATCCAGGGC GGATCGAAAA CAAAAATTTA TCTGATCCGC ATGGGCGGAT TTGATACGCA CGCGCAACAG GTTGAAACAA CCAGTGCAAC GATGGGTAAT CATGCCGCCT TGATGTATCA CATCTCTTCA GCCATGCGTG CTTTCCAGGA TGATCTGAAA GCACGGAGTA TCGATGAACG TGTATTAACT ATGACAACAT CTGAATTCGG CAGAAGAATT TATTCAAACG GAAGTTATGG TACCGATCAC GGTATAGGTG CGCCAATGAT GCTCTTTGGT AAAGGTGTTG TACCAGGCTT GTCGGGCACA AACCCGGACT TAACGCAGGA CAATGTAGCC ATGCAGTTTG ATTACAGACA GGTGTATGCA AGTATTCTTA AAGACTGGAT GTGTGTGGAC GCAAGTCTTG TTGATAATGA GTTTGGCATT CTTTGGGGGA ACTATCCCGG AAGAGGTACA ACACTGCCTA TTATAAATAA TAATTTAATT TCCAGTGTAA ATGATTTCGT GCGCGATAGA TTTTACATGA ATAATTGTTA TCCCAATCCG GCAGTCAATT TTACCGATAT TACATTTTAT ATTAACACCA GTTGCGTTGT TACCATATCC TTGCACGATA GTACCGGCAA GCTGATAAAA AATATTGTTT CTGAAACCTA TCCTGTGGGT GAAAGTAAAG TCTCTGTAGA TTTGCGGGAA ATAAAAGCCG GCATGTATTT CTACCAGATT GAAACGTCTT ACTTTAAAGA TGCCAAGAAA ATTGTTATTC AAAAATAG
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Protein sequence | MKRRDFLTKL PALALPFVIN GTYFNILADT LSPLQRLAAN CPNDRVLIIL QLHGGNDGIN MLLPVSDYDR YYNVRANIAI PDKGARAFIR LDSTLANTDQ IGLHPDMVGV KSMYDQGLVR MIQGVSYENH NQSHFRGRDI LFMGGGSSDY LTSGWAGRYL KNNYAPDVYP ADFPNANMPD PLALEFNDDL SLVFHQDDNI PTSIAIDDPE SFFDLVDTLP GYNDKPGIDA RGIPPASVAN SPYGKEMNWI LNLEEKSDEY HSRILQVYNK GKATDPNISY PVSYPLNAPK QRVKNPLSAK LKIIANLIQG GSKTKIYLIR MGGFDTHAQQ VETTSATMGN HAALMYHISS AMRAFQDDLK ARSIDERVLT MTTSEFGRRI YSNGSYGTDH GIGAPMMLFG KGVVPGLSGT NPDLTQDNVA MQFDYRQVYA SILKDWMCVD ASLVDNEFGI LWGNYPGRGT TLPIINNNLI SSVNDFVRDR FYMNNCYPNP AVNFTDITFY INTSCVVTIS LHDSTGKLIK NIVSETYPVG ESKVSVDLRE IKAGMYFYQI ETSYFKDAKK IVIQK
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