Gene CHU_3363 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3363 
Symbol 
ID4185058 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3844295 
End bp3846031 
Gene Length1737 bp 
Protein Length578 aa 
Translation table11 
GC content43% 
IMG OID638073353 
Producthypothetical protein 
Protein accessionYP_679942 
Protein GI110639732 
COG category[S] Function unknown 
COG ID[COG5267] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.174936 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTTAG TTCAATTTTC CGGTATTCTT GAACGTAAAC GTGCTGCGCA TTTATTGCGT 
CGCATCACTT TTGGACCAAA CAAAGGAGAA ATAGATACGT TTTCTTCGCT CACTCCGGCA
GCTGCCTTAA CCCTGTTATT TACAGATACA GCTGAACCAC AACCACCGGT TGATCTTAAA
ACGGGCACAA CCTGGGTAAC TGCTCCTTCA ACCGCAGCGA ACAGTACAGA TGCCGTGCTG
CAGGAATACT TCAAAGGCTG GTGGCTTAAA CAGATGCTGG CGCAGGATAT TTCTTCAGCA
AACAGGCTTC CGGCAATGGT ACGGGAAAAG ATCGTATTTT TTCTGCACAC GCATTTAACT
ACCATACAGG AAGTAGTGGG TAACAGCCGG GCTTTATATT TCCAGAATGT TTTGTTCCGG
AAATATGCGC TGGACGGCAG TAAACCGGCT TTGATTAATT TAAAGGAATT AACAAAAAAG
GTAAGTATTG ACAATGCCAT GCTGATCTTA CTGGATGGCA AATTAAATGT GAAAGGTGAC
CCGAATGAAA ATTTCGGAAG GGAACTGATT GAATTATACA CGCTGGGAAA AGGTTTACAG
GGAAATATTC CTCCCTCAAC CGTTCAGGGC GATTATATTT ATTATACCGA ACAGGATGTT
AAAGCTGCGG CGTTGGTTAT GTCTGGCTGG GACACAAATA CAACCTTCAC TACACTTGAT
GCAGACACGG GCCTTCCAAG AGGCAAGGCT AAAACTAATG CCACAACAAT TGCTACGCAG
CATGACAACA GTGTTAAACA GTTCAGTGCA CGTTTTAACA ACGCTACCAT TACGCCCAAC
CCTGCTTTAC TAAGCAGCGG ACAGGCAACG GAAGCAAGTA TGATCGATGA GATCAGCCAG
CTGGTGGATC TGATTTATTC TCAGGCGGAA TGTCCGAAAA ATATCTGCCG CAAAATTTAT
CGCTTCTTTA TTTACCACGA AATAGATGCA ACAATAGACG CTACCATCAT TTCGGAGCTT
GCAGCAACGT TTGTAGCGAA TGGATACAAG ATTGAACCGG TAATAAAAGA ATTGCTGGGT
AGCCAGTATT TTTATGATCT GATGGATGCT TCGGTTGATA ACGACAAGTT CGGTGCTATT
ATTAAATCAC CGCTGGAACT TGTTACAGAA ACGCTCAGCT TCTTCGAATA TAGCTTACCC
GCGCAATTGG ATGCGTATTA CAAAACAACG GATAATCTAT TCACCCAATT ACGGATCATG
GGAATGAATT TCATGAACCC GATAGATGTT TCCGGCTTTG ATGCATACCA TCAATATCCA
ATGTTTAACA GAGCATGGAT CTCAACCAAT GCATTAAACA GAAGATATAA TTTTATTTTT
TTAAGCATGA CTACCGACAA CATGATGATG GATGGCGCCA TAAACATTGA TCTGTATGCA
TATATGAAAC TCAGGTTCGG ATCTGTTGCA GCAGATCCGG ATGCTTTTAT CCGTGAACTG
ATTTCATATC TGTTTCCGCT TTCACAGGAA ATAACTGAAA TAACAACAGA GCGTCTGAAT
TATTTCAAAC AACAGTTCTT TCAGTTAGGG GAAGCGCTGC CGCAAGGCCC GCTTGTATTC
TGGCAGTTCA GCTGGGCAAA TGGAGATACG GTCCCTGCAA GTAAAACAGA TGCACGGGGC
ATGTTACAGG ACCTCGTAAA CGCACTCTTA CAGTCACCGG AATTTCAACT TCATTAA
 
Protein sequence
MALVQFSGIL ERKRAAHLLR RITFGPNKGE IDTFSSLTPA AALTLLFTDT AEPQPPVDLK 
TGTTWVTAPS TAANSTDAVL QEYFKGWWLK QMLAQDISSA NRLPAMVREK IVFFLHTHLT
TIQEVVGNSR ALYFQNVLFR KYALDGSKPA LINLKELTKK VSIDNAMLIL LDGKLNVKGD
PNENFGRELI ELYTLGKGLQ GNIPPSTVQG DYIYYTEQDV KAAALVMSGW DTNTTFTTLD
ADTGLPRGKA KTNATTIATQ HDNSVKQFSA RFNNATITPN PALLSSGQAT EASMIDEISQ
LVDLIYSQAE CPKNICRKIY RFFIYHEIDA TIDATIISEL AATFVANGYK IEPVIKELLG
SQYFYDLMDA SVDNDKFGAI IKSPLELVTE TLSFFEYSLP AQLDAYYKTT DNLFTQLRIM
GMNFMNPIDV SGFDAYHQYP MFNRAWISTN ALNRRYNFIF LSMTTDNMMM DGAINIDLYA
YMKLRFGSVA ADPDAFIREL ISYLFPLSQE ITEITTERLN YFKQQFFQLG EALPQGPLVF
WQFSWANGDT VPASKTDARG MLQDLVNALL QSPEFQLH