Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_3360 |
Symbol | lpdA |
ID | 4185055 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 3838046 |
End bp | 3839446 |
Gene Length | 1401 bp |
Protein Length | 466 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638073350 |
Product | dihydrolipoyl dehydrogenanse |
Protein accession | YP_679939 |
Protein GI | 110639729 |
COG category | [C] Energy production and conversion |
COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 47 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0306833 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACGACG TAGTAGTTAT CGGTTCTGGT CCTGGTGGGT ATGTAGCAGC AATCCGTTGC GCACAGCTTG GTATGAAGAC CGCATTGATT GAAAAATATA GCACGCTGGG TGGTACCTGC TTAAACGTAG GTTGTATTCC TTCAAAAGCT TTACTGGATT CATCTGAACA TTATTACAAT GCAACACACA CGTTCAAAGA ACATGGCATT GATGTAAAAG ATGTAAAAGT GAATCTGAAA CAAATGATTG ACCGCAAGGC AGGTGTTGTA AAACAAACAT GCGACGGCAT CAACTATTTG ATGAAGAAGA ATAAAGTCGA TGTGCATACA GGCATCGGTT CTTTCGTTGA TAAAAACACG ATTAAAGTAA CCGCTGCTGA CGGAAGCGTG AAAGAATTGA AAACAGCGAA AACAATTATC GCTACCGGTT CTAAGCCTAC ATCGTTACCA AATGTTGCAA TCGATAAAAA ACGAATCATA ACTTCTACGG AAGCATTGGA ACTGACAGAA GTACCAAAAC ACCTGATCGT TATTGGTGGC GGCGTTATTG GTATGGAACT TGGTTCGGTA TATGCACGTT TGGGCGCGAA AGTTTCTGTC GTTGAATTCA TGGATACCTT GATTCCTACG ATGGATAAAG CGTTGGGTAA AGAATTGATC AAAGTTTCTA AAAACCATTT AGGTTTCGAT TTTTACTTCA GTCATAAAGT AACAGGCGCA ACGGCTAAAG GCAAGGAAGT AACGGTTACG GCAGAAGATA AAGACGGTAA AGTACTGGAA TTGAAAGGTG ATTATGTGTT GGTAGCAACA GGGCGCCGTC CGTACACAGA AGGTTTAGGC CTTGAAGCAG CAGGTGTAAA ATTAGACGAA CGCGGCAGAG TAGCTGTTGA CGGCCACTTA CAGACAAACG TTCCGGGCAT TTATGCAATC GGTGACGTGG TTGTTGGCGC CATGCTTGCA CACAAAGCAG AAGAAGAAGG CGTGTTTGTT GCAGAATCGA TCGCCGGACA AAAACCACAC ATCAATTATA ACTTAATACC GGGTGTTGTG TATACCTGGC CGGAAGTTGC AGCGGTTGGT TATACCGAAG AGCAATTGAA AAAGGACGGC AAAGCATACA AAGTAGGAAA CTTCCCGTTC AAAGCATCCG GTAGAGCGAG AGCGAGCATG GATCTGGATG GTTTTGTAAA AGTACTTGCC GACAAAGAAA CAGACGAAAT TTTAGGTGTA CATATGATCG GGCCACGTGT GGCAGATATG ATCGCAGAAG CAGTGGTTGC AATGGAATTC AGAGCATCAG CTGAAGACAT CAGCAGAATG TCTCATGCGC ATCCAACGTT CACAGAATCA TTTAAAGAAG CGTGTTTAGC TGCTACGGAT AACAGAGCGC TTCACATTTA A
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Protein sequence | MYDVVVIGSG PGGYVAAIRC AQLGMKTALI EKYSTLGGTC LNVGCIPSKA LLDSSEHYYN ATHTFKEHGI DVKDVKVNLK QMIDRKAGVV KQTCDGINYL MKKNKVDVHT GIGSFVDKNT IKVTAADGSV KELKTAKTII ATGSKPTSLP NVAIDKKRII TSTEALELTE VPKHLIVIGG GVIGMELGSV YARLGAKVSV VEFMDTLIPT MDKALGKELI KVSKNHLGFD FYFSHKVTGA TAKGKEVTVT AEDKDGKVLE LKGDYVLVAT GRRPYTEGLG LEAAGVKLDE RGRVAVDGHL QTNVPGIYAI GDVVVGAMLA HKAEEEGVFV AESIAGQKPH INYNLIPGVV YTWPEVAAVG YTEEQLKKDG KAYKVGNFPF KASGRARASM DLDGFVKVLA DKETDEILGV HMIGPRVADM IAEAVVAMEF RASAEDISRM SHAHPTFTES FKEACLAATD NRALHI
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