Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_3357 |
Symbol | |
ID | 4185052 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 3836250 |
End bp | 3836849 |
Gene Length | 600 bp |
Protein Length | 199 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 638073347 |
Product | RDD family membrane protein |
Protein accession | YP_679936 |
Protein GI | 110639726 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0260303 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTACTTGA TAAAAATTAA CATGCAACAG GAAATAATAG ATGTGCTGAG TGAAGAAGCC GAAGCAGACA ATGTTGTGTA TGCGACATTC TGGAAACGTG TTGGCGCTAC ATTATTGGAT GGATTGATTT TAAGCCCGGT GAATTATGGT CTCATATTTT TATCGATGGT TTATTATAAG ATCTATGTGC TTGCTGTATT ATCCGGAATG GTCCATTTGG TTTATAAACT TTATATGGAA AAAAAATATG GACAGACACT CGGAAAAATG GTGGTTAGAA TTAAAGTGAC CGGCGATGCA TTCCAGCCGC TTGATTACGC TCAGACGTTA AAACGCAATT ACTACTATGT CCTGTCAATG ATCTTTTCTG CAATAATCTG TATGAATTTA TTCAGCACAG AAGCTTTTCA GCACGCAGAT ACCTATATGG AACTAATGAA GGCACAGCAG ATGCAGGCAC CGGTCTATAA ATATTTGCAG TATGCATTTT CAGGAGTATT TTTTATTGAT ATCCTGTTTA TGTTAAATGA TGACCGGAAA AAGACCGTAC ACGATAGATG GGGGAACACT GTTGTCATTA AAAAACCGGC TGATATGTAA
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Protein sequence | MYLIKINMQQ EIIDVLSEEA EADNVVYATF WKRVGATLLD GLILSPVNYG LIFLSMVYYK IYVLAVLSGM VHLVYKLYME KKYGQTLGKM VVRIKVTGDA FQPLDYAQTL KRNYYYVLSM IFSAIICMNL FSTEAFQHAD TYMELMKAQQ MQAPVYKYLQ YAFSGVFFID ILFMLNDDRK KTVHDRWGNT VVIKKPADM
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