| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_3354 |
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| Symbol | hsdM |
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| ID | 4185049 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 3833441 |
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| End bp | 3835027 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 638073343 |
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| Product | type I restriction-modification system, M subunit |
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| Protein accession | YP_679933 |
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| Protein GI | 110639723 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0286] Type I restriction-modification system methyltransferase subunit |
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| TIGRFAM ID | [TIGR00497] type I restriction system adenine methylase (hsdM) |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.501947 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0329699 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGAAG ATCAGAAACG AATATTAGAA CAGCAGCTTT GGAATATTGC TAATACCCTT
CGAGGTAAAA TGAATGCAGA TGAATTCCGT GATTATATTC TGGGATTTAT TTTTTATAAA
TATCTGAGTG AAAAAATGGA GATTTTTGCC AATGATATTC TTAAGCAAGA TAAAATAAGC
TTTCGCGAAA TAACTCCTAA ACTAAAACAA GGCAAGGAAT ATTTAGAAGC AATCAGAGAA
GAGGCTTTAG AAAAATTAGG TTATTTTTTA AAACCGGAAG AATTGTTTAG TGAGGTAGCG
AAGAGGGGTA GAGGTTCCAA TGACGAAGGA GAAAATTTTG ATGAAGCTAA AACAAATTTC
ATTTTAGAAG ATCTTCAAAA AATTTTAATC AATATTCAGC TAAGTACCAT GGGTACGGAT
AGTGAAGAGG ACTTCGATAA TCTTTTCGAG GACATGGATT TGAACAGTAC CAAACTGGGC
AAAACGCCAG ATGCACGAAA TGCGATTATT GCAAAAGTCC TGACTCACCT CGATAAGATA
GATTTTAAAT TAGAAGATTT AGAGTCGGAT GTATTGGGAG ACTCGTATGA ATATCTCATA
GGACAATTTG CAAGTGGTGC AGGGAAAAAG GCAGGTGAAT TTTATACTCC TCAGCAGGTT
TCTAAAATCC TCGCAAAGAT TGTTACTACA GAAAAACATA AACTAAAGTC TGTGTATGAT
CCTACATGTG GTTCGGGCTC TTTATTGCTT AGAGTAGCGA GAGAAGTAAA AGATGTTGCA
AAGTTTTACG GACAGGAGAT GAATCGTACT ACGTATAACC TTGCACGAAT GAATATGATC
CTGCATGGTG TGCATTACAG AAAATTTGAT ATAAAGCAGG AAGACACGCT TGAGCATCCA
CAGCACATGG GGCAACAGTT TGAAGCTATC GTAGCCAATC CACCTTTTTC AGCGCAATGG
AGCGCGAACC CATTGCATTT AAGTGATGAT CGTTTCAGTC AATATGGTAA ACTGGCTCCG
GCAAGTAAAG CAGATTATGC GTTTGTACAG CACATGGTAC ATCATTTGGC GGAGAATGGG
ATCATGGCGC TTGTATTACC GCATGGCGTA TTGTTTAGAG GTGGAGCAGA ACAACATATC
CGTAAATATT TGATCGAACA GAAAAATTAT CTTGATGCAG TGATCGGCTT GCCGGGAAAT
ATTTTTTATG GAACAAGTAT TCCAACCTGT ATTCTGGTGA TTAAAAAATG TCGCGAAATG
CCGGATAATA TTTTATTCAT TGATGCCAGC AAAGAATTTG AAAAAGTAAA AACGCAGAAT
ATTTTAAGGG AAAAACATAT TGATAAAATT GTTGATACAT ACCGTAGCAG AAAGGAAATA
GAAAAGTACA GTCACTGTGC TTCGTTAAAG GAAATCGCTG AGAATGATTT CAACCTCAAT
ATCCCACGAT ACGTAGACAC GTTTGAAGAG GAAGAAGAAA TAGATATACA GGCAGTGATG
GCTGAAATAA AAAATCTTGA AGCCAAGCGT ACGGATCTGG ATAAACAGAT TGATGTGTAT
ATGAAAGAAC TTGGATTGGT ATTTTAA
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| Protein sequence | MSEDQKRILE QQLWNIANTL RGKMNADEFR DYILGFIFYK YLSEKMEIFA NDILKQDKIS
FREITPKLKQ GKEYLEAIRE EALEKLGYFL KPEELFSEVA KRGRGSNDEG ENFDEAKTNF
ILEDLQKILI NIQLSTMGTD SEEDFDNLFE DMDLNSTKLG KTPDARNAII AKVLTHLDKI
DFKLEDLESD VLGDSYEYLI GQFASGAGKK AGEFYTPQQV SKILAKIVTT EKHKLKSVYD
PTCGSGSLLL RVAREVKDVA KFYGQEMNRT TYNLARMNMI LHGVHYRKFD IKQEDTLEHP
QHMGQQFEAI VANPPFSAQW SANPLHLSDD RFSQYGKLAP ASKADYAFVQ HMVHHLAENG
IMALVLPHGV LFRGGAEQHI RKYLIEQKNY LDAVIGLPGN IFYGTSIPTC ILVIKKCREM
PDNILFIDAS KEFEKVKTQN ILREKHIDKI VDTYRSRKEI EKYSHCASLK EIAENDFNLN
IPRYVDTFEE EEEIDIQAVM AEIKNLEAKR TDLDKQIDVY MKELGLVF
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