| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_3351 |
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| Symbol | hsdS |
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| ID | 4185046 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 3830174 |
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| End bp | 3831238 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 638073340 |
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| Product | type I site-specific deoxyribonuclease S subunit |
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| Protein accession | YP_679930 |
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| Protein GI | 110639720 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0732] Restriction endonuclease S subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00146581 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0102246 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGATTTC CTGAGTTTGA TGAGGAATGG GAAGAGAAAA CGTTGGGGGA GATCTGTGAA
ATGCAAGCTG GAAAATTCGT TAGTGCTAGT GAAATAAAAG AGCAGCATTT TGACGGCTTA
TTTCCTTGTT ATGGTGGAAA TGGATTAAGA GGTTATACTA AATCATATAA TTACGATGGT
AAATATTCCT TAATTGGTCG ACAGGGAGCA TTATGTGGCA ATGTAAATTT TGCTAATGGA
AAATTTCATG CAACAGAGCA TGCAGTGGTT GTCACCCCGT TAAATGGCAT TAATACAGTT
TGGATGTTTT ACTTGTTAAC AAATTTGAAT TTAAATCAAT TTGCTACAGG CATGGCCCAA
CCAGGACTAT CTGTACAAAA TTTAGAAAAG GTTGAGAGTA CAATTCCTAA AGCTATAGAT
GAGCAAGAAA AAATTGCTTC TTTTCTAACG CTAATTGACG GACGTATCTC AACTCAAAAC
AAAATAATTA AGGAATTAGA ATTACTTATT AAATCAATTA GCCAAATTAT ATTTCATGGA
CACAGATATA AATTCAAAAA AGCAAGCTTA GGTTCAATCT GCACTATAAA AAAAGGCGAG
CAAATTAACA GTTCGGTGTT AAGTGAATCA GGACTTTACG CAGTAATGAA TGGAGGAATT
ACTCCATCGG GATATTACTC ACAATATAAT TGTGTTGGTA ATACTATCTC TATTAGCGAA
GGAGGAAATT CATGCGGCTA TGTCCAATTC AATGATAAGA AATTTTGGAG CGGGGGACAT
TGTTACACAC TATCCGAAAT CAACGCAGAA ATTTCTAATA AATACCTATA TTACTTTATG
AAATTCTCTG AGAATTTAAT AATGTCTCTT CGCGTAGGCT CGGGATTACC TAATATCCAG
AAAAAAGATC TTGAAAAATT CAATGTAGCC TTTCCTGAAA TAAATCAACA GTATCAAATC
TCTAAATTTT TGGATCTTTT AACAGAAAAG ATCCAAGTTG AAAAATCTCT TAAAACTTCC
TTAATAAGGC AGAAGCAGTA TGTACTAAAA AAAATGTTCA TATAA
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| Protein sequence | MRFPEFDEEW EEKTLGEICE MQAGKFVSAS EIKEQHFDGL FPCYGGNGLR GYTKSYNYDG
KYSLIGRQGA LCGNVNFANG KFHATEHAVV VTPLNGINTV WMFYLLTNLN LNQFATGMAQ
PGLSVQNLEK VESTIPKAID EQEKIASFLT LIDGRISTQN KIIKELELLI KSISQIIFHG
HRYKFKKASL GSICTIKKGE QINSSVLSES GLYAVMNGGI TPSGYYSQYN CVGNTISISE
GGNSCGYVQF NDKKFWSGGH CYTLSEINAE ISNKYLYYFM KFSENLIMSL RVGSGLPNIQ
KKDLEKFNVA FPEINQQYQI SKFLDLLTEK IQVEKSLKTS LIRQKQYVLK KMFI
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