Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_3337 |
Symbol | |
ID | 4184587 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 3806365 |
End bp | 3807573 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638073326 |
Product | acetylxylan esterase |
Protein accession | YP_679916 |
Protein GI | 110639706 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00939156 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGTATACAA GAAATGTACG GATTCCACAG TTTCAGCTGC AAATGGCGAT TGCGTTATTA TTATCGGGAC TTATTTTCCT GTCCTGCAAA AAGGATACGG TAAGCCCGTC TGTACCCATT CCAGCAGTAG ATACCAATAT GGTGTTTATT GATGCTTCAA ATACAAACAT TCACTATTCA GGGAGAATTG ATTTCAGCAA CCCTAAAGCA CCTGCTTTCT GGTTTCCCGG CATTTCAATA AAGGCATCTT TTCAGGGACC TTCTATTGAT GTGGTTATTA AAGATGATGC TTCAGGTACA GATCAGGGTA CAAATTATTA CAACATCTTT ATTGATCAGC AGCTTCACAC CGTTTTGAAA GTAAACGCAG AAGATACGTT GTATAAAATT GCCCGTAACC TTACAGATGC AAACCATACG ATAGAAGTTT TCAAACGCAC AGAGGCGCAG GTTGGATCTT CCAGCTTTAA GGGATTTTGT CTGCAGGCCA ATAAAAACCT GACAGCTTCA GCAAAGCCCG CGCACAAAAT TGAATTCATT GGTGATTCTT ATACCTGTGG CTACGGAAAT GAATTAAGTA TACCTGCACC GCCCAACGGT AATCCCGACA CAGGCTTTCA TTCTGTAAAT GAAAACAATT ACACGGCCTG GGGAGCGATA GTTGCACGTG AGCTGGATGC CGAATATCAT TGTACGGCTT ATTCTGGCAG AGGTATATAC CGTAACAACA ACGGCGCTGC TACAGGCGTA TTACCTTCTA TTTATAACAG AATTAATCCG GATGATGCAT CCTCTCAATG GAACACCGCA ACGTACATTC CGGATGTTAT CGTCATTCAT CTTGGCACAA ACGATTTTGC GCCTGAACAG CTGTCAACAC CAGACATGGT AGATTCGGCA GCCTTTGTAA GCGGGTACAT TAATTTTATT ACAACACTGA GAAGCTATTA TCCGGCAGCA AAAATTATTT GTGTACGTCC GAATTCATTA ACAGATTATT ACCCGGTTGG CCTGAAAGCA TTAACCCGTA TGACGCGTTA TACAAAAGCG GTAACAGACC ATTTCGTCCC AACAGATGCC AATGTATTTT ATTTCGCTCT TGCACCACAG AATGCGCCAT ATGGTGAAGA CTGGCATCCT TCTGCTGCAA CGCATCAATC CATGGCTGCA CAGATAAAAA CATTTATTAA AACACGTGCA GGCTGGTAA
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Protein sequence | MYTRNVRIPQ FQLQMAIALL LSGLIFLSCK KDTVSPSVPI PAVDTNMVFI DASNTNIHYS GRIDFSNPKA PAFWFPGISI KASFQGPSID VVIKDDASGT DQGTNYYNIF IDQQLHTVLK VNAEDTLYKI ARNLTDANHT IEVFKRTEAQ VGSSSFKGFC LQANKNLTAS AKPAHKIEFI GDSYTCGYGN ELSIPAPPNG NPDTGFHSVN ENNYTAWGAI VARELDAEYH CTAYSGRGIY RNNNGAATGV LPSIYNRINP DDASSQWNTA TYIPDVIVIH LGTNDFAPEQ LSTPDMVDSA AFVSGYINFI TTLRSYYPAA KIICVRPNSL TDYYPVGLKA LTRMTRYTKA VTDHFVPTDA NVFYFALAPQ NAPYGEDWHP SAATHQSMAA QIKTFIKTRA GW
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