Gene CHU_3337 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3337 
Symbol 
ID4184587 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3806365 
End bp3807573 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content42% 
IMG OID638073326 
Productacetylxylan esterase 
Protein accessionYP_679916 
Protein GI110639706 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00939156 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGTATACAA GAAATGTACG GATTCCACAG TTTCAGCTGC AAATGGCGAT TGCGTTATTA 
TTATCGGGAC TTATTTTCCT GTCCTGCAAA AAGGATACGG TAAGCCCGTC TGTACCCATT
CCAGCAGTAG ATACCAATAT GGTGTTTATT GATGCTTCAA ATACAAACAT TCACTATTCA
GGGAGAATTG ATTTCAGCAA CCCTAAAGCA CCTGCTTTCT GGTTTCCCGG CATTTCAATA
AAGGCATCTT TTCAGGGACC TTCTATTGAT GTGGTTATTA AAGATGATGC TTCAGGTACA
GATCAGGGTA CAAATTATTA CAACATCTTT ATTGATCAGC AGCTTCACAC CGTTTTGAAA
GTAAACGCAG AAGATACGTT GTATAAAATT GCCCGTAACC TTACAGATGC AAACCATACG
ATAGAAGTTT TCAAACGCAC AGAGGCGCAG GTTGGATCTT CCAGCTTTAA GGGATTTTGT
CTGCAGGCCA ATAAAAACCT GACAGCTTCA GCAAAGCCCG CGCACAAAAT TGAATTCATT
GGTGATTCTT ATACCTGTGG CTACGGAAAT GAATTAAGTA TACCTGCACC GCCCAACGGT
AATCCCGACA CAGGCTTTCA TTCTGTAAAT GAAAACAATT ACACGGCCTG GGGAGCGATA
GTTGCACGTG AGCTGGATGC CGAATATCAT TGTACGGCTT ATTCTGGCAG AGGTATATAC
CGTAACAACA ACGGCGCTGC TACAGGCGTA TTACCTTCTA TTTATAACAG AATTAATCCG
GATGATGCAT CCTCTCAATG GAACACCGCA ACGTACATTC CGGATGTTAT CGTCATTCAT
CTTGGCACAA ACGATTTTGC GCCTGAACAG CTGTCAACAC CAGACATGGT AGATTCGGCA
GCCTTTGTAA GCGGGTACAT TAATTTTATT ACAACACTGA GAAGCTATTA TCCGGCAGCA
AAAATTATTT GTGTACGTCC GAATTCATTA ACAGATTATT ACCCGGTTGG CCTGAAAGCA
TTAACCCGTA TGACGCGTTA TACAAAAGCG GTAACAGACC ATTTCGTCCC AACAGATGCC
AATGTATTTT ATTTCGCTCT TGCACCACAG AATGCGCCAT ATGGTGAAGA CTGGCATCCT
TCTGCTGCAA CGCATCAATC CATGGCTGCA CAGATAAAAA CATTTATTAA AACACGTGCA
GGCTGGTAA
 
Protein sequence
MYTRNVRIPQ FQLQMAIALL LSGLIFLSCK KDTVSPSVPI PAVDTNMVFI DASNTNIHYS 
GRIDFSNPKA PAFWFPGISI KASFQGPSID VVIKDDASGT DQGTNYYNIF IDQQLHTVLK
VNAEDTLYKI ARNLTDANHT IEVFKRTEAQ VGSSSFKGFC LQANKNLTAS AKPAHKIEFI
GDSYTCGYGN ELSIPAPPNG NPDTGFHSVN ENNYTAWGAI VARELDAEYH CTAYSGRGIY
RNNNGAATGV LPSIYNRINP DDASSQWNTA TYIPDVIVIH LGTNDFAPEQ LSTPDMVDSA
AFVSGYINFI TTLRSYYPAA KIICVRPNSL TDYYPVGLKA LTRMTRYTKA VTDHFVPTDA
NVFYFALAPQ NAPYGEDWHP SAATHQSMAA QIKTFIKTRA GW