Gene CHU_3333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3333 
SymbolfabG 
ID4184583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3802543 
End bp3803385 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content44% 
IMG OID638073322 
Productshort chain dehydrogenase 
Protein accessionYP_679912 
Protein GI110639702 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATATGA AAAAAGTTTG GTTCATCACA GGTTGCTCCA CTGGCTTTGG CCGTGCGCTT 
GCCAGCCATG TATTAAGTAT CGGCCAGCAA GTTGTTGTTA CCGCACGTAA GATTTCTGAT
ATCAGCGATC TTATTATTGG ACATGAATCC GATGTATTGG CGCTTTCGCT GGATGTAACA
AAGCCGGATG AAATTAAGAA TGCGGTTCAT AAAGCAATTG ACCGTTTCGG ACGGATTGAT
GTATTGGTAA ACAACGCAGG TATCGGTTAT TTTGGTGCTG TGGAAGAAAG TGAAGATGAA
GCCGTAAGAA AAATGTTTGA AATAAATTTC TTTGGTTTAG CCAACATGAC CAAAGCCGTT
TTACCGGTCA TGCGCAAACA GCGCAGCGGA CATGTGATCA ATATTTCTTC TGTCGGCGGC
CTGGTGGCAT TTCCGGCTTT AGGTTATTAC AATGCAAGTA AGTTTGCCGT AGATGGTTTG
TCTGAATCGT TAGCCAAGGA AGTTGCGCAC CTGGGTATTC ATGTAACCAT TGTTGCGCCA
AGCGGCTTCC GTACAGATTG GGCGGGTCGT TCTGCAGAGA ATAGTAAAAT TGTTATTGAT
GATTATGCTG AAAGTGCGGG TGCAAACAAA TCTTTTATAC GCGGATACAG CGGCAATCAA
CCAGGCGACC CGAAACGTGC GGCACAGGCT ATTGTAAAAG CAGTGGAATC AAAAGAACCG
CCACTACGTT TATTACTTGG TGCAGCGGCG CTTAAAGGTG CAACAGCAAA ACTGGATGTA
TTGAAAAAAG ATTATGATGC CTGGGCTGAT ACAACTGTAT GGGCAGATCA TCCAAAAGAA
TAA
 
Protein sequence
MDMKKVWFIT GCSTGFGRAL ASHVLSIGQQ VVVTARKISD ISDLIIGHES DVLALSLDVT 
KPDEIKNAVH KAIDRFGRID VLVNNAGIGY FGAVEESEDE AVRKMFEINF FGLANMTKAV
LPVMRKQRSG HVINISSVGG LVAFPALGYY NASKFAVDGL SESLAKEVAH LGIHVTIVAP
SGFRTDWAGR SAENSKIVID DYAESAGANK SFIRGYSGNQ PGDPKRAAQA IVKAVESKEP
PLRLLLGAAA LKGATAKLDV LKKDYDAWAD TTVWADHPKE