Gene CHU_3326 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3326 
Symbol 
ID4186695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3796580 
End bp3797152 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content33% 
IMG OID638073317 
ProductAraC family transcriptional regulator 
Protein accessionYP_679907 
Protein GI110639697 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAAG AAATTCTGCA CATTAAAAAT ATGGTCTGCC CGCGATGTAT TGCATCGGTA 
GAAGATATTC TGCATGAATT AAATTATTCT GTTGAGCAGG TTCTACTGGG CGAAGCTGTA
TTAAATGAAA CCTTATCGGT CAATCAGCTT GCTGTATTAA AAGACAAATT ATTAAAGCAG
GGATTTGAAT TACTTGAAGA TAAAAAAGAC AAAATAGTTG AAGCAGTTAA AACGCACGTC
ATTCAGCTGG TAAAAAATCC GGACAAGCAT TCTTCCACAA AATTATCTAC CTATTTATCT
AAAGAACTTG GCTATGATTA TTCTCACATC AGTTCACTTT TTACAGCCAG TCAGCACATC
ACGATTGAAA AATATGTGAT TCTTCAGAAA ATAGAATACG TAAAAGAATT ACTTTCTTAC
AATGAGTTAA CTGTTTCAGA AATTTCCGAT ACATTAAATT ACAGCAGTGT TGCAGCACTT
TCTGCCCAGT TTAAAAGTAT TACCGGAATT ACACCTTCTA AATTTAAATC AAGTGATCAG
GCAAGAAAAT CACTGGATAA TTTAATTCCA TGA
 
Protein sequence
MNKEILHIKN MVCPRCIASV EDILHELNYS VEQVLLGEAV LNETLSVNQL AVLKDKLLKQ 
GFELLEDKKD KIVEAVKTHV IQLVKNPDKH SSTKLSTYLS KELGYDYSHI SSLFTASQHI
TIEKYVILQK IEYVKELLSY NELTVSEISD TLNYSSVAAL SAQFKSITGI TPSKFKSSDQ
ARKSLDNLIP