Gene CHU_3318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3318 
Symbol 
ID4186688 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3790163 
End bp3790540 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content40% 
IMG OID638073310 
Producttransposase 
Protein accessionYP_679900 
Protein GI110639690 
COG category[S] Function unknown 
COG ID[COG2764] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones57 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATAC CATCCGAATA TCTGCCCGTC ATGCCGTATC TTATTTTAAA AGATTCGAAA 
GGATTTTTAA CATTTGCGAA AGAAGTTTTT GGTGCAACGG AACAGATGAT TGTTCCCGCA
GAAGACGGCA GCATCATGCA CGGCGAAATA AAAATTTTTG ATGCCGTGAT TATGTTTGCA
CAGGCGGGAG ACAGCTGGAA AGAAAAACCT GCCGGCATGT ATATTTATTT GCTGGAAGTA
AATGCGGTGT ATGAAAAAGC ACTTGCAAAA GGTTCAATAA ATTTAATGCC TCCGGATAAA
AAAGAATACG GCTACACAGC AGGTTTTGAA GATCCGTTCG GTAACCAATG GTGGATCGTA
GAAGGAGAGA AAGATTAA
 
Protein sequence
MKIPSEYLPV MPYLILKDSK GFLTFAKEVF GATEQMIVPA EDGSIMHGEI KIFDAVIMFA 
QAGDSWKEKP AGMYIYLLEV NAVYEKALAK GSINLMPPDK KEYGYTAGFE DPFGNQWWIV
EGEKD