Gene CHU_3312 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3312 
Symbol 
ID4186682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3785144 
End bp3785644 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content42% 
IMG OID638073304 
Producthypothetical protein 
Protein accessionYP_679894 
Protein GI110639684 
COG category[R] General function prediction only 
COG ID[COG1778] Low specificity phosphatase (HAD superfamily) 
TIGRFAM ID[TIGR01662] HAD-superfamily hydrolase, subfamily IIIA
[TIGR01670] 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.865326 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGAGT TTTCAGATAT AACAACATTC ATTTTCGATG TGGATGGTGT ATTAACAGAT 
GGTTGTGTAA TTGCATATGA ATCTGGTGAG CAGGTTCGCC GATTTTTTGT AAAAGATGGT
TATGCCATTG AAAAAGCACT GGCTGCCGGT TATCACATCG TGATCATTAG TGGCGGTGAA
CAGGAAAGTG TCCGTAAACG TCTTAAATTT CTGGGTATTA CAGATGTATT CCTTGGAGTG
AAAGATAAGC TCACATTGTT TAATGAATAT ACACAAACAA AACATGTTGA CCCGTCAACC
ATTTTATATA TGGGCGATGA TATTCCGGAT TACAAAATGC TGAAACTGGT AGGTTTTCCA
ACCTGCCCGG CAGATGCATC CATCGACATC AAACCCATCT GCAAATATGT TTCTCCGAAC
AATGGAGGCC AGGGTGCAGT ACGCGACGTG ATCGAAAAAG TAATGCGCGC GCAGGGTAAA
TGGCATCCTC AAAATTGGTA A
 
Protein sequence
MAEFSDITTF IFDVDGVLTD GCVIAYESGE QVRRFFVKDG YAIEKALAAG YHIVIISGGE 
QESVRKRLKF LGITDVFLGV KDKLTLFNEY TQTKHVDPST ILYMGDDIPD YKMLKLVGFP
TCPADASIDI KPICKYVSPN NGGQGAVRDV IEKVMRAQGK WHPQNW