| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_3278 |
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| Symbol | carB |
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| ID | 4184782 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 3749686 |
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| End bp | 3752499 |
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| Gene Length | 2814 bp |
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| Protein Length | 937 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638073271 |
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| Product | carbamoyl-phosphate synthase large subunit |
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| Protein accession | YP_679861 |
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| Protein GI | 110639650 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTAAGG ATACAAGTAT CAAACACATT TTGATTATCG GTAGCGGTCC AATTGTAATC
GGACAAGCTT GCGAATTTGA TTATGCTGGC TCACAAGCTG CACGTTCTCT TCGTGAAGAA
GGAATTGAAG TTACCCTGAT CAACTCGAAT CCGGCTACAA TTATGACTGA TAAAGTTGTA
GCGGACAATG TGTATTTATT GCCATTAGAG AAAAAATCAA TCATTAAGAT CCTTGAAAAT
CACAAAATCG ATGCGGTATT GCCAACGATG GGGGGCCAGA CTGCCTTGAA CCTTGCGATG
GAATGTGATA AAGCCGGTGT CTGGAAAAAA TTTGGTGTCC GTATGATCGG TGTTGATATT
AACGCGATTG AGACTACAGA AGACCGTGAG AAATTCCGTT TGAAAATGAT TGAGATTGGT
GTTGGAGTTT GTAAAGGCGC AACAGCAACA TCTTTCTTAC AGGGAAAAGA AATCGCTCAG
GAAATCGGTT TTCCACTGGT AATCCGTCCT TCCTTCACCC TTGGCGGTAC AGGCGGCGGT
TTCGTGCACA CGGCAGATAA ATTTGATGAA GCGTTAACAA AAGGTCTTCA CGCTTCGCCA
ACGCATGAGG TATTGGTTGA GCAAAGTATC TTAGGCTGGA AAGAATACGA ATTGGAGATC
TTACGTGATA GTATCGGTAA CATGATCATC ATCTGTTCGA TCGAGAACTT TGACCCGATG
GGTATTCATA CCGGTGACTC TATTACTGTA GCGCCTGCTA TGACGCTGCC GGATACCATC
TATCAGGAAA TGCGTGATCA ATCCATCAAA ATGATGAAAG CGATCGGTAA TTTCGCGGGT
GGCTGTAACG TACAGTTCTC CGTTTGCCCG GATACAGATC ATATCATTGG TATTGAGATT
AACCCGCGTG TATCACGTTC TTCTGCACTT GCTTCAAAAG CTACGGGTTA CCCGATTGCA
AAGATCTCTG CGAAACTTGC GATTGGTTAT AACTTAGATG AATTAAAAAA CCAGATCACT
AAAACAACAA GTGCCTTCTT CGAACCGGCA TTGGATTATG TGATCGTAAA AGTTCCGCGC
TGGAACTTCG ATAAATTTAA AGGTGCTGAC CGTACCCTTG GTTTACAAAT GAAATCTGTT
GGTGAAACAA TGGGTATCGG CCGTAACTTC CAGGAAGCAT TACAGAAAGC ATGTCAGTCA
TTAGAAATTA AACGTAACGG TTTAGGTGCT GACGGTAAAG AATTAACAAA CCAGGATCAG
ATCCTGGACA GTCTGGCGAA CCCAAGCTGG AACCGTTTGT TCCATATTTA TGATGCTTTC
AAATTAGGGG TTCAGTTCAA GACCATTCAG AAGCTGACAA AAATTGATCC GTGGTTCTTA
ACACAGATTG AAGAGCTTGT GCTTCTTGAG AAAGAAATTC AGAAAACAAC GATCCAGAAC
ATCAGCAGAG AAATGCTGAA AACAGCTAAG CAAAAAGGAT ACGCTGACCG CCAGATCGCG
CACCTGCTCC GTTGTATGGA AAGTGAAGTA TTTTCAAAAC GTCATGAATT CGGAATCAAG
CGTATTTACA AAATCGTTGA TACCTGTTCT GCTGAATTTG AAGCAAAAAC GCCTTATTAC
TATTCTACGT TTGAAGGTGA GAACGAATCC ATTCCTTCAG ATAAAAAGAA AATTATTGTA
TTAGGTTCAG GCCCGAACCG TATCGGACAA GGGATCGAGT TTGACTACTC GTGTGTACAC
GGTGTATTGG CAGCGAAAGA ATGCGGTTAT GAAACGATCA TGATCAACTG CAACCCTGAA
ACGGTTTCTA CAGATTTTGA TATTGCTGAC AAGTTATATT TCGAACCTGT ATTCTGGGAA
CATATCTACG AAATCATTCT TCTTGAAAAA CCGGTTGGCG TTATTGTTCA GCTTGGCGGA
CAAACAGCGC TTAAACTTGC CGAGAAATTA GAACGATATG GCATCAAAAT TATCGGTACT
GATTTCCAGT CACTGGATTT AGCTGAAGAT CGCGGCCGTT TCTCTTCTTT ATTAAAAGAG
ATCAACATCC CTTATCCGGA ATTTGGTGTC ATTGAGAACG CAGACGAAGC TGTTGCGATC
AGTAAAAAAT TAAACTTCCC GTTATTGGTT CGTCCTTCGT ATGTATTGGG CGGACAGAGC
ATGAAGATTG TGATCAACGA ACAGGAGCTG GAACAACACG TGGTGAACTT ATTGAAAGAT
CATCCGGGTA ATCAGGTTCT TGTGGATCAT TTCCTTGAAA ATGCAATTGA AGCGGAAGCA
GATGCCATCT GCGACGGCGA GAATGTACAC ATCATCGGTA TCATGGAACA CATAGAGCCG
GCAGGTATTC ACTCCGGTGA TTCGCACTCT GTATTGCCTC CGTTTGATTT AAGTGATGAC
GTGATCAGAC AGATTGAAGA GCATACGAAG AAAATTGCTA TAGCACTAAA AACAGTGGGC
CTGATCAACA TTCAGTTTGC GATCAAAAAC GAAATCGTTT ACATCATTGA AGCCAACCCA
AGAGCTTCCC GTACGGTGCC GTTCATCTGT AAGGCATACG ATGAGCCTTA TGTAAATTAT
GCTACCAAGG TGATGCTGGG TGAAAACAAA GTAACCGACT TTACCTTCAA CCCGAAGAAA
AACGGTTATG CGATCAAAAT TCCTGTATTC TCTTTCAATA AATTCCCGAA TGTAAACAAG
GAACTTGGAC CTGAAATGAA ATCAACGGGA GAAGCCATCT TATTCATCGA CGATCTGCAC
GACGATGCAT TCGTGAAATT ATATTCTGAA AGAAATCTTT ATTTGAGCCG ATAG
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| Protein sequence | MPKDTSIKHI LIIGSGPIVI GQACEFDYAG SQAARSLREE GIEVTLINSN PATIMTDKVV
ADNVYLLPLE KKSIIKILEN HKIDAVLPTM GGQTALNLAM ECDKAGVWKK FGVRMIGVDI
NAIETTEDRE KFRLKMIEIG VGVCKGATAT SFLQGKEIAQ EIGFPLVIRP SFTLGGTGGG
FVHTADKFDE ALTKGLHASP THEVLVEQSI LGWKEYELEI LRDSIGNMII ICSIENFDPM
GIHTGDSITV APAMTLPDTI YQEMRDQSIK MMKAIGNFAG GCNVQFSVCP DTDHIIGIEI
NPRVSRSSAL ASKATGYPIA KISAKLAIGY NLDELKNQIT KTTSAFFEPA LDYVIVKVPR
WNFDKFKGAD RTLGLQMKSV GETMGIGRNF QEALQKACQS LEIKRNGLGA DGKELTNQDQ
ILDSLANPSW NRLFHIYDAF KLGVQFKTIQ KLTKIDPWFL TQIEELVLLE KEIQKTTIQN
ISREMLKTAK QKGYADRQIA HLLRCMESEV FSKRHEFGIK RIYKIVDTCS AEFEAKTPYY
YSTFEGENES IPSDKKKIIV LGSGPNRIGQ GIEFDYSCVH GVLAAKECGY ETIMINCNPE
TVSTDFDIAD KLYFEPVFWE HIYEIILLEK PVGVIVQLGG QTALKLAEKL ERYGIKIIGT
DFQSLDLAED RGRFSSLLKE INIPYPEFGV IENADEAVAI SKKLNFPLLV RPSYVLGGQS
MKIVINEQEL EQHVVNLLKD HPGNQVLVDH FLENAIEAEA DAICDGENVH IIGIMEHIEP
AGIHSGDSHS VLPPFDLSDD VIRQIEEHTK KIAIALKTVG LINIQFAIKN EIVYIIEANP
RASRTVPFIC KAYDEPYVNY ATKVMLGENK VTDFTFNPKK NGYAIKIPVF SFNKFPNVNK
ELGPEMKSTG EAILFIDDLH DDAFVKLYSE RNLYLSR
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