Gene CHU_3268 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3268 
Symbol 
ID4185280 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3735482 
End bp3737575 
Gene Length2094 bp 
Protein Length697 aa 
Translation table11 
GC content37% 
IMG OID638073260 
Productpeptidyl-prolyl cis-trans isomerase 
Protein accessionYP_679850 
Protein GI110639640 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTATTT TCAATAAAAT CAATCAAAGA TCCGGCCTGG TAGTAGGTAC TATTGTAGCA 
GGTTTATTAT TATTCCTTTT AGGGGATGCT TTTACATCAA AAAATTCTTT TTTCTCTAGT
TTTAATAACA AAGTAGGTGA AATCGATGGC AGTAACATTA CTGTTGAAGA ATTCCAGAAA
GAAATAACAA AAGCAGAAGC ATTATATGGC GGCAACGGAA ACAATGCCAA TATGGATGAT
CTTGCGTGGA CACAATTAGT GTTTGAACGG GTTAATAAAG TTGTTTACGA AAAAGCAGGA
ATCGAAATTT CTGAAGGTGA AAAAGTTGAT TTGTTAGAAG GTGAACACAT GTCTGATGTT
GTAAAACAAC AGTTCGGTTC AGCAGAACAA TTGAAACAAT TTTTAAAATA TTTAGATTCT
GACCAAATCC AGTCAGAAGA AGAGCGTGCA AGCATTAAAG GCCGCTGGAG AGCATTAAAA
GAATACGTAT ATAACGAGAG AATGCGCAGC AAATACGAAA CGATCATTAA AAAATCGGAG
TATGTTACAA AAGCAGAAGC AAAACGTTAT TACCATGCGT TAAATGATAA AGCAGAAGCT
GAATATGTAT ATGTGCCTTA TTTTTCAATC AATGACACAA CGATTACGGT TACAGATGCA
ATGCTTGAAG ATTATTTAAA AGCACATAAA AATGAATTTG AAGTTGAAGC AGGCAGATCG
ATTGAATTTG CAGTATTCAA CAACGTGCCT ACAGGCGTTG ACAGTTCTTA TGTTAAAAAA
GATTTAGCGG AATTAAAAGA TGAGTTTGTG TTAGCTAAAA ACGATTCTGC GTTTATCCGT
TCAAATTCAG ATGCACCGGC TGATCCTAGC TATGTTCAGT TAAATCAACT GCCTCCAGCA
CTTGCAGCAC GTGTAAATTC ATTACAGATT GATAGCGTTT ACGGACCGTT CTCCTATGGT
ACAGGATATT CACTAACTAA AATATTGAAA ATTGAAAGTG ATACAAATGT AATGGCTAAA
GCCAGTCACA TTTTATTCCG TACAAACGAA ACAGACCCTG CAGAGAAAAA AGCGGAAGCC
AAAAAACAGG CACAGCAGAT CTTAGCAGAA ATTCAAAACG GCGCAAGCTT TGAAAAAATG
GCCGCTCAGT ACGGCGGTGA TGGTACGGCT GCAAATGGCG GTGATCTTGG ATGGTTCGGC
AAAGGCCAGA TGGTTAAACC GTTCGAAAAT GCAATCTTTG GCGCTTCTAA GCCAGGTTTG
TTACCAAATA TTGTTGAGAC ACAATTCGGA TACCATATTA TCCGTGTAGA TGTTGCAAAA
ACAGGCCGTA AGTTTTTGAT TGCATCGGTT CAGAAAAATG TTGAAGCGTT TGACAATACC
GTTGACTCTA TTTACAGAAA CGCTGACGCA TTTGCTGCTT CAGTAAAAGA TACGGGTACA
TTCAGAACAG AAATTAAAAA ATACACAGCA GGTGTTGCTA AATATGAGCA GGCAAATGTT
GATGGCGCTG CAAAAGGAAT TACCAGCATA AACGAAGCAA GAGAAATTGT TAAGTGGTTA
TACAGCGACG ACAGATCAGT AAATGATGTT TCTTCGGTAT TTACTGTAGA GAATAAAAAC
GTTGTTGTAT TACTTACAAG AATACGTGAA AAAGGAACCG CTTCTGTTGA AGATGTAAAA
GATCAGATCA AACCAAGAGT GATCATCGAA GCAAAAGCAA AACTTATTAA AGAGAAATTA
AAAGTTGAAG GCAATGATTT TGCTGCAGCT GCTAAAGCAT ACGGTAAAGA TGCTGTTACA
GGTACTGCTT CAGATATTTC ACTTTCTTCA GGTATGATTA CAAACGTTGG CTACGAACCG
GAAGCAGTAG GTGCTTTATT TGGTTTAGCT AAAGAAAAAA AGACAGAAGC ATTTACCGGT
GAAAACGGTG TATTGGTATT AAAAAACAAA AACATTACCG TTTCTGAAGT TGCAGATTAC
AATCAATTTG TGACGCAATT ACAGCAGCAG CGCAATAACA GATTGGCATA TGGTACAGTT
GAAGCGGCAG TTAAAAAGAC CGTTGAAATT GAAGATATGC GTTACAGATA CTAA
 
Protein sequence
MGIFNKINQR SGLVVGTIVA GLLLFLLGDA FTSKNSFFSS FNNKVGEIDG SNITVEEFQK 
EITKAEALYG GNGNNANMDD LAWTQLVFER VNKVVYEKAG IEISEGEKVD LLEGEHMSDV
VKQQFGSAEQ LKQFLKYLDS DQIQSEEERA SIKGRWRALK EYVYNERMRS KYETIIKKSE
YVTKAEAKRY YHALNDKAEA EYVYVPYFSI NDTTITVTDA MLEDYLKAHK NEFEVEAGRS
IEFAVFNNVP TGVDSSYVKK DLAELKDEFV LAKNDSAFIR SNSDAPADPS YVQLNQLPPA
LAARVNSLQI DSVYGPFSYG TGYSLTKILK IESDTNVMAK ASHILFRTNE TDPAEKKAEA
KKQAQQILAE IQNGASFEKM AAQYGGDGTA ANGGDLGWFG KGQMVKPFEN AIFGASKPGL
LPNIVETQFG YHIIRVDVAK TGRKFLIASV QKNVEAFDNT VDSIYRNADA FAASVKDTGT
FRTEIKKYTA GVAKYEQANV DGAAKGITSI NEAREIVKWL YSDDRSVNDV SSVFTVENKN
VVVLLTRIRE KGTASVEDVK DQIKPRVIIE AKAKLIKEKL KVEGNDFAAA AKAYGKDAVT
GTASDISLSS GMITNVGYEP EAVGALFGLA KEKKTEAFTG ENGVLVLKNK NITVSEVADY
NQFVTQLQQQ RNNRLAYGTV EAAVKKTVEI EDMRYRY