Gene CHU_3261 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3261 
Symbol 
ID4185273 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3725286 
End bp3726149 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content42% 
IMG OID638073253 
ProductSAM-dependent methyltransferase 
Protein accessionYP_679843 
Protein GI110639633 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2230] Cyclopropane fatty acid synthase and related methyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0234445 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCATAA GGAATTCCAA AACGTTTACT TCAACCGATA TTGCAACCTA TTACGATGTA 
AGCGAAGATC ATTACATGTA CTTTTGGGAT CTGAATCAAA GCCATTCTCT GCACTATGGT
TATTGGGATG CGTCAACAAA AACATTCCGC GAAGCACTCG CAAACATCAA TAGGGTTCTG
GCAGAAAAAG CTTCAATCAC TGCCGGTACC AGGGTGCTCG ATGCTGGCTG TGGTGTAGGT
GGTTCTTCCA TCTGGCTGGC AAAAAATAAA CAAGCAAACG TTACAGGCAT TACCGTAAGT
AAGAAGCAGG CTGCCCGTGC CAATACATCT GCAGCAGCTG TAAACCCCGG CGGCACTGCA
GTATTTGACG TGCAGGATTA CACAAACACG CCCTATCATT CAGAATCGTT TGATGTTGTC
TGGGCGATTG AAAGTGTGTG CCATGCTGCC AACAAAGAAG ATTTTATTAA AGAAGCATAC
CGTTTACTTA AGCCAGGCGG ACAATTAATT ATGGCTGATT TTTTTATTGT AAAAGACGGT
AATGCTGACG ATCAGCGGAG CATAGATGCA TGGGGCCATG GCTGGGCAGT ACCTTTTTTT
GAAAAGAAAG ACGCCTTTCA GCATATGTTA CTGAAGGCTG GTTTTAACAC CGCTGATATG
ATAGACAGTA CAGAACATAT CCGCAGGTCG GCAAAAAGAT TGTATTATGC TTTTTTCCCT
GGCTGGATCA TTTCAAAGCT ATATAATTTA GTGAACAGAA GGACAACAGA GTTCTCAAAA
AACAATGTTT ACACAGCTTA TTACCAATAC AAAACTTTGA AAAAGGAATT GTGGAAGTAT
TATATTGTGC ATGCAAAAAA ATAG
 
Protein sequence
MGIRNSKTFT STDIATYYDV SEDHYMYFWD LNQSHSLHYG YWDASTKTFR EALANINRVL 
AEKASITAGT RVLDAGCGVG GSSIWLAKNK QANVTGITVS KKQAARANTS AAAVNPGGTA
VFDVQDYTNT PYHSESFDVV WAIESVCHAA NKEDFIKEAY RLLKPGGQLI MADFFIVKDG
NADDQRSIDA WGHGWAVPFF EKKDAFQHML LKAGFNTADM IDSTEHIRRS AKRLYYAFFP
GWIISKLYNL VNRRTTEFSK NNVYTAYYQY KTLKKELWKY YIVHAKK