| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_3259 |
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| Symbol | |
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| ID | 4185271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 3718413 |
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| End bp | 3724862 |
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| Gene Length | 6450 bp |
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| Protein Length | 2149 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638073251 |
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| Product | hypothetical protein |
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| Protein accession | YP_679841 |
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| Protein GI | 110639631 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.468729 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAACAG GTTGGGGCTT GACACTGGAG CGGGAAATTA TCGCGAATAA TACAAGTGTA
TTTGGATTCT CGCTTCGGGG AAGGTATTTG CATACGTGGA TGTGGGGCAG GGATTCCCGT
CCGTTTTATG GAATTGCAAA CGATGAAAAT CTAAACGGAA CGGCAAATCC TGCGATCGAT
TATACCGCAG CTGGTTATGC CTATAGAAAT TTTTATACAA AGACAGATGA ATTTTCATTA
GAAGGTTTGT TAATACTCAA CAAACTGCGG GCACATAGTG GTTTTAAGAT ATATGGTTTC
GGAGGAATTG GTGCAACGGG GTTTAACTCA AAGATCAATC AGCTTGATGG AACCAATACA
CAGTATGATT ATTCTAACGT GTCTACGTTC AGCAAAGCAA TTGCAAAAAA TGATCTGAAT
TTACTGTGGG ATAAAACATA CGAAACAAAT GGCATTGCCG GTCAATCAAG AAATTCGTAT
GTATTATCAG GTGCCATTGG TGTTGGTGTT GGTATCAAAC TTTCTTCCAA TGTATATTTA
GGCTGGGAGC ATAAATATAC ATATACATCT ACCGATATGT TAGATGCAAG CAAATGGAAT
AACGATGCAT CGCCAAGTTT AAAAAACGAC AGGTACCATT ACAGCAGTTT ATTTTTAACG
GTTGCGATCG GTGCAGGCAA AGCAACTGCA CAACCTACAC GTGATCAGAC AACCTATTAT
CCACCGCCTG TAGTGCCGGT TACAAATCCC AGACCGGAAA TAACAGTATT GTACCCGCGT
GAAAATCCGG TTTATCTGAA TGATTGTAAT GCTCAAATAA AAGTCAGCAT CACAAATCTT
GAATCCATAA ATCAGATTAC CGTATTGCGT GATGGGAATG TATTGGGTTC TGCGTATTAT
ACATTTGACC GGACAACAGA AGTTTTAACA ATCAATACAC CGATTGCAGG CAATACTGTT
TTTTCAATCA TTGCTCAAAA TGCCGGCGGG AAGGATACCA AATATGTATA TACCAATTGC
GGACCGGTGT TAACTACTCC GGCTCCCATT ACACCTACAG TTGCCTTTGT CAGTACAAGT
TCCAACGACT GTATCGCACA TGTTGTAGCT TCTGTAAAAA ATGTAACCGA TGAAAAATCC
ATTGAGGTTA TTATGGACGG AATTGTTTTA TCACCCCGCC AATATAATTT CAATCCATAT
AATGGTTCGG TTATTATTCA GATGCCATTC AATCAATTCA CTTCTATATC TGTGCGTGCA
ACCAATGGCA CAAGCTCTGT AGTTGAATCC ATTAATTTAT CCTGTACGCC AAAAAATGTG
CTTATAAAAG AACCGCCGGT AATTTCAATA TCAAATTCTC AGGTGGATAA AAATACAGCA
GGAGATTGTG TTGCAAAAAT TACAGCTACA GTAATTGGCA TTGAAGGTAT CAGCAATATC
GAAGTTACAC GCAACGGAAC AATTCTGCGT GCGCCGTCTT ACACGTACAA TGCATCAACA
AAAGTATTAA CTATATCGAA TCAGATAATA GGATCAAACA CATTTATCAT ACGCGCGCAA
AATGCTGTAA GCTCAACTAC TGCAACAGTC AGTTTAAATT GCGTACCGCA AACAGTTTTA
GTAACACCTT CAATTGTTTT GATTCAGCCA AATTCAAATA CATACGAATC GCAGGACTGC
AAAGAGCAGA TTTCTGCAAA AATGGTACAT GTTACTTCCG TACAAAATAT TGATGTGCAG
ATAAACGGCT CAACGATAAA TAAAAATTTA CTGCACTTTA ATCCCACAAC AGCTATTTTA
ACATTTGATG CTGTTATAAC AAAACAAGCA ACCATTATTA TCAGCGCTTC AAACGATGCA
GGCAATACAT CACAAACGAT CAATATTAAC TGCGCACCGG TCATTACACC AACGATAGAC
GTTTCTTATC CATCAACAGA ACCATATGTT TCTGCTACAT GTAAAGAAAA TGTTACCGCA
GTTGTTACAG GTGTTTCAGA TCTTTCCGCA ATTCATATTA CGCTGAATGG AATTGCTGTT
AATACAGGAC TTGTATTTGA TGCCGCAACA GGTAAATTAT CTATACCGGT TAATTTCAGC
GGGCGCTCCG AACTATTGAT TAATGCTGTA GGTAAGGGTG CTGCAACATC TAAAAAAATT
ACACTGATCT GCCAGACACT TGCCAAACCA GTGATTACAG TTGTATCACC AAATGCAAAT
CCATACATTT CAACAGGATG TCAGGAACAG GTAACGGCAC AGGTAGAGAA TGTTGAATCC
GTTAAGGATA TAACTGTAAC ACTGAATGGT GTCGCACTTG CTAAAGGTGT TATGCAGTAT
GATACTGTTA CCGATATACT TTCATTTCCT GTAAGTATTA AAGGTACTGC AACGATTGTT
ATTTCAGCGG TTAATGCAAG CGGTTCTGAA ATGAAATCAA TCAGTATACA ATGTAAGCCG
ACTATTTTAC CTGCCCCTAC CGTAAAATTA ATTACGCCGC AAACAACCAA TACCATTTCG
AACACCTGTA TTGAAGCGGT TAAAATTCAA CTGACAAATT GTGCATCGTT AGAAAATATT
ACGGTTACTG AAAATGGCAA CACCATTGCT TCTGAAAATT TAGCTTACTC AGCAATAACC
GGTATATTAT CATTTCAGGT GAACGTTGCA ACAACATCAA CACTTGTTGT AACGGCAAAA
AATAATGGGG GGTCAGCATC TACTACGTTT GTCATTCAAT GTAAACCAAC GGAATTGCCA
TCGGTAAGTA TTTTAAGACC TGTAGGTACT CCATTTATTT CAACCACGTG TTCAGAAAAC
ATTGAAGCCA TTGTAAAAAA TATTTCAGGT GTTAATCAGG TTGATGTGTT GTACAACAAC
GTTGCTCTTG ATAAATCGCT TTTGACATAT GATACAACAT CTAACACATT ATCTTTTGTT
CATACTTTCA CCGCAAATGG AAGTTTGATT ATTAAAGCGC AGAATGAAGC CGGACAGGCT
TCTAAAACAG TGGCGTTTGA ATGCAAGCCG GTACTGCCGC CGGTTCTTGT TATTAACAGC
CCAGCAGCAG ACCCGTTTAT TTCTGAATCC TGTTCAGATA CAATCATTGC TACGGTTCAG
AATATTGAAA GTATAGATGC CATCACGGCA TATGCGAATA ATGTTTTAAT TCCGAAAGAT
AAGATTGTGT TCACCAAAGC AAACGGACGT ATCCGTTTAA TCTATTCTTA TAACACTGAT
ACAGAAATTA AATTAATGGC CGTGAATGCA GCCGGCACAG CAACTAAACT GGTGCACCTT
ACATGCGCTC CTGTTTTACA GCCAACAATT AAACTGGTGA ATCCGGTAGC AGAAACGGTC
GTTTCTACTT CATGTGTAGA CAATGTATTG ATGACATTAA CAAATGTTTC AGAGATGAAT
CAGATTCAGG TTAAAATCAA TTCCGTTTTA CTGAACAATA CACTTTATAC ATATAATGCT
GCAACAGGCT TGCTGACAAT ACCCGTAACA ACCACGACTG TTTCTACGGT TGAAGTTGTT
GCAACAAACA AAACAAAAAG AGCTTCTAAG ACAGTACAGA TAACGTGTAA GAAACTGCCA
TTGCCGGCAG TACAAATAAC GAGTCCTTCA ACTACGGTAC TTACAAACTG CAGTACTTCA
GTGAAGGCAA CCGTAACGAA TGTAACGTCC AAAGAACAGT TAGTAATTAC AGTTGATGGC
AGATTGCTGA ATGCTGCCAG CTATACATTA ACAGCAAATA TTGTTTCTAT ACCGGTTACT
GTTTCCGGAC AATCTTTGGT CTCTATCACA GCTACAAATG AAACCGGTGC AGTAACAGAA
AAAATAGCGT TAACCTGTAA TGTTTCTCAG GTTATTACCG GACCTTCAAC GAACTCATGC
AGTACAATTT CTAAAACTCC GTTTACAACC TGTGCAACCT GTAATGATAC GGTGAAAGTT
TCTTCCGGAA ACATATCGGT GGATGCAAAC AGGAAAGTGT GTATTACAAA TACATTTTCC
GGAAATGTAA ATATGAATGG TGGCCAGCTG GTGATCTGCG GAACAGCAAC AATACAGAAT
ATTAATTTCA ACAGCGGAGA TATTGTGGTG ACAGGAACGG CATCATTTGA CAATGTTAAT
ATGAATAGTC AGACTTCTGC TATCCGTAAT TATGGAACGA TTAGATTTTC GAACTTTACG
TACAATGGCA GATTTGAAAA CCACGGACAG GCAACCATAC AGGCAGACTT CAATATAAAT
TCAACTGCTG TATTTATAAA TACCGGTACA TTAAATGCAA ATACAAGCTT TAATAATAAC
AACGTGGCCT GCAACTCCGG AACGATTACC ATTAACGGAA ATCTGAAAGA TAATGGGTCC
GCTGATTTTA TAAATTCATG TAAACTTATT GTTAACGGAC AGTTTCATGT AAATAATACC
TTTGAAAACT CAGGTTCTAT TCAGGTGGCA TCTACTACAT TTATTAATGG CGCAGGTACA
TTCAAAATGA ATGCAGGTTC AAAACTGATT ACAGACGCAT TAATTATAAA TGGAACAATT
AATGGTCCCG CACAAAGTTG TACGTCAATA AATGTAGCAT CGCAGACACA GATCAATAGC
AGTGCAAGAG TATCGGGTAA GATTGATATT TGTGATGTAA ATGGCATTGA ATTAAAGTCG
GGCATACTTG CCGCAACGGT TACTACAGAT TGCAGCTGTA TGATTAATAT GTCTGGTGGA
TGTGGTTCAA ATGGTGATAT GAATGATCAG ATAACGGTTT GCCATAAATC CGGAGATAAC
ATACAAACGC TTACGATTTC AAAGTCGTTA TTGGCAAGCC ACCTGGCACA TGGTGACCAT
ATCGGTACGT GTACAGAAGC GGATAAGACG GTTATAAAAC AAGAGCCCGC AGTAACAGAA
CCTGTTGTAA CGCCGCCTGT TATTGTTGCG CCTGTGGTAG TACCTCCGGT AGAAGACAAA
CCTGTTGAAG AAGAAAAAGT GACCATCTGT CACAAGCCGC CGGGTAATCC GGAAAATGTG
CAGACATTAA CAATATCAAA AAATGATTTG AAGGCTCACC TGGCACACGG AGATAACATT
GGTGCATGCG TGAAAGGAAG TAAAACGGTT GAAGATGATC CTGCAGTTCC GCCGGTTAAA
GAAGAAAAAA TAATCATCTG TCATACATCC GGCGGCGGTG TACAAACATT AACCGTTTCA
AAAAGTGATT TGTCTGCACA CTTAGCACAT GGAGACCATA TCGGTGCCTG TGCAGAAGAA
CAATCGCCAG TTAAGGAAGA GACAATACCA ACCGTTCAGG AAGAAGAAAA AGTAATCATT
TGTCACAAAC CCCCGGGCAA CCCAACAAAT GTACAAACCC TGACGGTTAA GAAGAGTGAT
CTTAAAGCAC ACCTTGCGCA TGGAGATTAT ATTGGTGCAT GTACGGTTGT AAAAGAACAG
CCTGTTGTCG TGCCTCCGGT TAATGAACCA AAAGATGAAA AAGTAATTAT CTGTCATAAG
CCTAAAGGCA GTACAAGTAT TGAAACACTT ACTATTTCTT CCAGAGATTT GGCTGCACAC
CTGGCACATG GTGATCATGT TGGTTCATGT ACTGATGCGG ACAAGCCGGT AATCCAGAGA
GAACCTGAAA CTCCTGATGT AATTGTTCCG CCAAAAGCAG AAGAGAACAA AGTAATTATC
TGTCATAAAT CTAAAGGCGG TACGAGTATT GAAACGCTTA CCATTCCGGA GAGTGCTTTG
TCTTCTCACC TGGCACACGG CGATCACGTT GGTTCGTGTA CGGATGCGGA CAGGCCAAAA
CCGGTTGAAG AGAAAAGAGT GACCATCTGT CACAAACCGC AGGGAAGCTC TACCATTGAA
ACAATTACCA TTCCGGAGAG TGCGCTGTCT TCACACCTTG CGCACGGAGA CCATGTGGGT
TCATGTACCG ATGCAGACAA GCCCAAGCCG GCTGAAGAAG AAAGAGTAAC CATCTGTCAC
AAGCCGCAGG GAAGTTCAAT TGTTCAAACG ATTACCATTC CGAAGAGTGC CTTGTCGCAA
CACCTGGCGC ATGGTGATCA TGTGGGTTCA TGTACCGATG AAGATAAACC GAAGCCGGTT
GAAGAAAAGA AAGTAGTAAT CTGCCACAAA CCTAAAGGCA GTTCAATTGT TCAAACAATT
ACCATTTCCG AAAGTGCGTT GTCGCAGCAT TTAGCACATG GTGATCATGT TGGTACGTGT
ACAGATGCCG ACCAGCCGGT CATTCAAAAG GAACCGGAAG TTGTTTCGCC GCAAACTGTT
CCGTCAACGG AAGAAGCGAA GGTTACCATT TGTCATAAGA AGACAGACGG TACAATGGAG
ACACTAACAA TTCCTAAGAG TCAATTGTCC TTCCATTTGC AGCATGGCGA TCATGTAGGC
GTATGTACAC CGCAGGAAAT GGTGAAATAA
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| Protein sequence | MGTGWGLTLE REIIANNTSV FGFSLRGRYL HTWMWGRDSR PFYGIANDEN LNGTANPAID
YTAAGYAYRN FYTKTDEFSL EGLLILNKLR AHSGFKIYGF GGIGATGFNS KINQLDGTNT
QYDYSNVSTF SKAIAKNDLN LLWDKTYETN GIAGQSRNSY VLSGAIGVGV GIKLSSNVYL
GWEHKYTYTS TDMLDASKWN NDASPSLKND RYHYSSLFLT VAIGAGKATA QPTRDQTTYY
PPPVVPVTNP RPEITVLYPR ENPVYLNDCN AQIKVSITNL ESINQITVLR DGNVLGSAYY
TFDRTTEVLT INTPIAGNTV FSIIAQNAGG KDTKYVYTNC GPVLTTPAPI TPTVAFVSTS
SNDCIAHVVA SVKNVTDEKS IEVIMDGIVL SPRQYNFNPY NGSVIIQMPF NQFTSISVRA
TNGTSSVVES INLSCTPKNV LIKEPPVISI SNSQVDKNTA GDCVAKITAT VIGIEGISNI
EVTRNGTILR APSYTYNAST KVLTISNQII GSNTFIIRAQ NAVSSTTATV SLNCVPQTVL
VTPSIVLIQP NSNTYESQDC KEQISAKMVH VTSVQNIDVQ INGSTINKNL LHFNPTTAIL
TFDAVITKQA TIIISASNDA GNTSQTININ CAPVITPTID VSYPSTEPYV SATCKENVTA
VVTGVSDLSA IHITLNGIAV NTGLVFDAAT GKLSIPVNFS GRSELLINAV GKGAATSKKI
TLICQTLAKP VITVVSPNAN PYISTGCQEQ VTAQVENVES VKDITVTLNG VALAKGVMQY
DTVTDILSFP VSIKGTATIV ISAVNASGSE MKSISIQCKP TILPAPTVKL ITPQTTNTIS
NTCIEAVKIQ LTNCASLENI TVTENGNTIA SENLAYSAIT GILSFQVNVA TTSTLVVTAK
NNGGSASTTF VIQCKPTELP SVSILRPVGT PFISTTCSEN IEAIVKNISG VNQVDVLYNN
VALDKSLLTY DTTSNTLSFV HTFTANGSLI IKAQNEAGQA SKTVAFECKP VLPPVLVINS
PAADPFISES CSDTIIATVQ NIESIDAITA YANNVLIPKD KIVFTKANGR IRLIYSYNTD
TEIKLMAVNA AGTATKLVHL TCAPVLQPTI KLVNPVAETV VSTSCVDNVL MTLTNVSEMN
QIQVKINSVL LNNTLYTYNA ATGLLTIPVT TTTVSTVEVV ATNKTKRASK TVQITCKKLP
LPAVQITSPS TTVLTNCSTS VKATVTNVTS KEQLVITVDG RLLNAASYTL TANIVSIPVT
VSGQSLVSIT ATNETGAVTE KIALTCNVSQ VITGPSTNSC STISKTPFTT CATCNDTVKV
SSGNISVDAN RKVCITNTFS GNVNMNGGQL VICGTATIQN INFNSGDIVV TGTASFDNVN
MNSQTSAIRN YGTIRFSNFT YNGRFENHGQ ATIQADFNIN STAVFINTGT LNANTSFNNN
NVACNSGTIT INGNLKDNGS ADFINSCKLI VNGQFHVNNT FENSGSIQVA STTFINGAGT
FKMNAGSKLI TDALIINGTI NGPAQSCTSI NVASQTQINS SARVSGKIDI CDVNGIELKS
GILAATVTTD CSCMINMSGG CGSNGDMNDQ ITVCHKSGDN IQTLTISKSL LASHLAHGDH
IGTCTEADKT VIKQEPAVTE PVVTPPVIVA PVVVPPVEDK PVEEEKVTIC HKPPGNPENV
QTLTISKNDL KAHLAHGDNI GACVKGSKTV EDDPAVPPVK EEKIIICHTS GGGVQTLTVS
KSDLSAHLAH GDHIGACAEE QSPVKEETIP TVQEEEKVII CHKPPGNPTN VQTLTVKKSD
LKAHLAHGDY IGACTVVKEQ PVVVPPVNEP KDEKVIICHK PKGSTSIETL TISSRDLAAH
LAHGDHVGSC TDADKPVIQR EPETPDVIVP PKAEENKVII CHKSKGGTSI ETLTIPESAL
SSHLAHGDHV GSCTDADRPK PVEEKRVTIC HKPQGSSTIE TITIPESALS SHLAHGDHVG
SCTDADKPKP AEEERVTICH KPQGSSIVQT ITIPKSALSQ HLAHGDHVGS CTDEDKPKPV
EEKKVVICHK PKGSSIVQTI TISESALSQH LAHGDHVGTC TDADQPVIQK EPEVVSPQTV
PSTEEAKVTI CHKKTDGTME TLTIPKSQLS FHLQHGDHVG VCTPQEMVK
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