Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_3248 |
Symbol | |
ID | 4184344 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 3705866 |
End bp | 3708727 |
Gene Length | 2862 bp |
Protein Length | 953 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638073241 |
Product | hypothetical protein |
Protein accession | YP_679831 |
Protein GI | 110639621 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01451] conserved repeat domain |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAAAAA TTTTACTGGC TTGTATACTT TTTATGTATA CGTTTTTGCA ACTCTCTGCG CAATGCCCCT CACCAGTCAC ACCAGGTGTC TCACTAACAC AATCATCATC AGGCGCTATT TGCTTAGGCA CCAATGTTAC ATTTACAGCA AATTCCGTAA ATGGCGGAAC ACCTGTTTAT GAGTGGACAT CGTCTATTCA TGGTATATTA TCCGCAACAA CAGCTACTTA TTCAAGTGCT ACGTTAATCG ACGGTGAAGT AATCACGGTA AAAATGACAA GCAGTCTTGC TTGTGCACAG CCTGCTCTGG CCTTGGCAAC TGCTACTGTA AGTTTAAAAG AACTTGTTAC GCCGGCAATC AATATTACTT CTGATAAAGC AACAATCTGT CCGGGTGAGG TAGTGCATTT TACCGTTACC ACGAGTGTAA ACGGAGGTTC GGCACCCAAC GGGCCAACGT ATCAATGGAG AAAAAATCAA GCAGTGATAC CAGGAGCAAC AACTTCAACG TATGCGACTG TTACAGCACA CCAGGATACA TATGATGTTG TCATGACTTC AGGTTTATCT TGTGTTACAA GCCCATCCGT TACATCAAAT TCAGTAGCCA TAACTGTTAC ACCCATTCCA GTGATGGCTG TAACTATAAC AGCAGACAAA ACAGCAATGT GTCCAAACAC GCCGGTAACA TTTACTGCCA CAGTTACGGG ATCTGGCGCA ACACCTGCAC CAAGTTATGA ATGGTTTATT ATAAAATCTG CCACAGGCAC CGTGGGCATA TCCCAAGGTG CAGCTTCTAC TTCAGCTAAT ACATTTACAA CTTCAGCGTT TTCAGCTACA GCTGATAAAG TATATGTATC TGTCAAAAGC AATGCATCCT GTGCAAGTAC ATCAACAGTT AATTCGAATG AACTTACACT CTCTGCCTTG GATGCATTAA CACCGGGCAC AATCGGATCT GACCAAACCA TCTGTTACAA TAGTCTACCC GTTTCAATTA CACAATTAAC AGCACCTACC AATAACATAG GTACACCCGT ATATCAATGG GAAGTATCTG CAATAGCCAC TCCAGGTGCA TATGTTACAT TACCCGGAGC CACTAATGCT ACATATACGC CTCCTGTTCC TTTAACACAG GATGTGTATC TACGCAGAAT TATTATGGAC CCGTCAATGC CCGCACCCTG CAATATAGCA ACAAGCAACG CCATTCACAT TACCGTGAGA CCTGGATTGA TGGCAGGTGT TATTTCACAA GATGAAATAA TTTGTTCGGG TGCTGCGCCC GAAGCAATTA CTTCAACGGT TTTGCCAACA GGCGGTACAG GAACATATAC TTACCAATGG CAACAATCTG TTTCGGGTAC TTTTGTTAAT ATACCAGGAG CAACAAACCA AAGCTATAGT CCGCCTGCAT TAACAATCAC AACCTTATTC AGACGTGTTG AAACATCAGG TAGCTGCGGT TATGTTACCA GTAATGTTGT AACTAAAACT ATTGTACCTC CTGATGTTGT AACAGCAAGT ATCAATAACC CCGGCCAAAT ATGCATTTCA GCCCCGGTTT TGTTTACAGC AGCAACAACC AACTCAGGAG CCGGTACACT TGACTATATA TGGAGTTTAG ACGGATTAAC TGTAGGAACA AACAGCCCTT ACTATTCTTA TACTTCAAAC TCTATAAATG ATACAGGAAA AAAATTACAT GTAAAAGTAA TCACATCTGC CGACTGCAAT ACTGGCCCTG CTATCTCAAA TGAAATAACG CTGGATATTG TAGCTGCTAC CATACCAGCA GTAAGTATTA CTTCTTCCGC TACTTCTGAG TGTACAGGCT TACCTATCAG CTTTTCAGTA TCACAGACAA CAGGCACTGG TAATGCACCC ACATACCAAT GGTATGTGAA AAGTTTTTCG GGTGTATCTA TACCCGTTGG AACAGGAAGC TTAAGCTATT CAAGCAGCAC GCTAAAAGAT GGAGACGAAG TATATGTAGA AATGACTTCA AATCTGCCTT GCGGAGTTGG CGAGAACCCA CATACTTCAA ATAAAATCAA CGTGAAAGTC TTACCTGTTC CTTCTCCGGT AATTAACCCG GGTGATCAAA CAATCTGTGT TAATGAATCT GTTATCTATA CAGCAACCAT TGGTACAGGA ACAACAGTGC AATGGTATAA AGATGGTACT GCTATAACCG GAGCTACAAA TAGTACATTT GCTGCTACAC AATCCGGCAT GTATTCTATT CAAGAAGACA ATAGTATATG CAGCGTACAT TCAGCAGTTT CTCCGCTTAC CGTTGACCCT TGCGGTGCAT TCAGTTCTTC CATCTCCGGA CCAAATCCTA TAACAAACGG ACAGCAAAAT GCTGTGTATA GTGTACCAAA CCAGACAGGC TTTACGTATG AATGGTCAAT CACTGGCGGT ACCATTATTA GCGGGCAAAA TACTAACACC GTAACCGTAG ACTGGGATGC GTCTACAGGC AATACACTGG CACGTACCAC TATTCCTTCG TATGCTCTTT CTGTAACTGA AACAAATCCG GACGGTCAGA AAAAAACTAC TACAGCAACG ATCAACACCG TTGCAACATC CATTGTTCAA TCACTTGCAC AATCCGGCAT AAAATTATTT CCAAACCCAA CTGCAGCATG GTTCAGTATT GAAATGCCGG AAAGCAATGT GGAGGTAAGT TATGAAATCC TGGATCTGAC AGGTGTTTTG GTAGCAAGCG GCTCATTCAC GTCTACTGGC AGTGATCAAA AAATTGCTGC TGATTTTGCT GTAGGCATGT ACCAGGTTGT GTTAACATAT AACGATACAG TTACAACTGC GCGTTTGAGT AAGGTACAGT AA
|
Protein sequence | MKKILLACIL FMYTFLQLSA QCPSPVTPGV SLTQSSSGAI CLGTNVTFTA NSVNGGTPVY EWTSSIHGIL SATTATYSSA TLIDGEVITV KMTSSLACAQ PALALATATV SLKELVTPAI NITSDKATIC PGEVVHFTVT TSVNGGSAPN GPTYQWRKNQ AVIPGATTST YATVTAHQDT YDVVMTSGLS CVTSPSVTSN SVAITVTPIP VMAVTITADK TAMCPNTPVT FTATVTGSGA TPAPSYEWFI IKSATGTVGI SQGAASTSAN TFTTSAFSAT ADKVYVSVKS NASCASTSTV NSNELTLSAL DALTPGTIGS DQTICYNSLP VSITQLTAPT NNIGTPVYQW EVSAIATPGA YVTLPGATNA TYTPPVPLTQ DVYLRRIIMD PSMPAPCNIA TSNAIHITVR PGLMAGVISQ DEIICSGAAP EAITSTVLPT GGTGTYTYQW QQSVSGTFVN IPGATNQSYS PPALTITTLF RRVETSGSCG YVTSNVVTKT IVPPDVVTAS INNPGQICIS APVLFTAATT NSGAGTLDYI WSLDGLTVGT NSPYYSYTSN SINDTGKKLH VKVITSADCN TGPAISNEIT LDIVAATIPA VSITSSATSE CTGLPISFSV SQTTGTGNAP TYQWYVKSFS GVSIPVGTGS LSYSSSTLKD GDEVYVEMTS NLPCGVGENP HTSNKINVKV LPVPSPVINP GDQTICVNES VIYTATIGTG TTVQWYKDGT AITGATNSTF AATQSGMYSI QEDNSICSVH SAVSPLTVDP CGAFSSSISG PNPITNGQQN AVYSVPNQTG FTYEWSITGG TIISGQNTNT VTVDWDASTG NTLARTTIPS YALSVTETNP DGQKKTTTAT INTVATSIVQ SLAQSGIKLF PNPTAAWFSI EMPESNVEVS YEILDLTGVL VASGSFTSTG SDQKIAADFA VGMYQVVLTY NDTVTTARLS KVQ
|
| |