Gene CHU_3230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3230 
Symbol 
ID4184755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3683166 
End bp3684125 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content43% 
IMG OID638073223 
Producthypothetical protein 
Protein accessionYP_679813 
Protein GI110639603 
COG category[S] Function unknown 
COG ID[COG4864] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.283864 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACAAT TATTGATTAT TATGGCATTA GTCGTTATCG GCTTTTTCTT CTTCCTGTAT 
TTTGTGCCCT TTAATTTATG GATCGGTGCC ATCTTCTCCG GTGTGCGTAT CGGTTTATTA
CAGCTGGTAC TTATGCGTAT CCGTAGTGTA CCGCCAAGAA TCATTGTAGA ATCATTGATA
ACCGCTACGA AAGCAGGCAT TCAGCTTACT GCAAATGAAT TGGAAACGCA CTTTATGGCT
GGCGGCAATG TACCGAATGT TATTAAAGCA CTGATCTCTG CTGATAAAGC AAACATTGCC
TTAACGTTTA AACAAGCTAC CGCTATTGAC CTTGCAGGCA GAGATGTATT TGAAGCGGTG
CAGATCTCTG TAAACCCGCA GGTAATTAAT ACCCCAAACG TTGCTGCCGT TGCACAGGAC
GGCATTCAGC TTATTGCAAA GGCACGTGTT ACACTTCGTG CAAACATTGC CCAGTTGGTA
GGTGGTGCAG GGGAAGAAAC GATTCTTGCC CGTGTGGGTG AAGGTATTGT AACTTCTATC
GGTTCTTCTA AGTCGCACAA AGAAGTATTA GAAAATCCGG ATAAGATTTC TAAACTTGTT
TTACAAAAAG GACTGGATGC CGGCACCGCT TTTGAAATTC TTTCCATTGA TATTGCAGAC
ATTGATGTAG GTGCAAACAT CGGTGCCAAA CTTCAGATTG ACCAGGCGAA TGCGGATTTA
AAAGTTGCAG AAGCAAAAGC GGAAGAACGC AGAGCAATGG CCGTAGCAAG TGAACAGGAA
ATGAAATCAA AAGCTCAGGA AGCACGTGCA AAAGTAATCG AAGCGGAAGC TGAAATTCCT
AAGTCTATTG CTGAAGCATT CAGAAGCGGC AACCTGGGCA TTATGGATTA TTATAAAATG
AAAAACATTC AGGCAGACAC GGGCATGCGT GATTCAATTG CCGGTGGAGG CAAAGAATAA
 
Protein sequence
MQQLLIIMAL VVIGFFFFLY FVPFNLWIGA IFSGVRIGLL QLVLMRIRSV PPRIIVESLI 
TATKAGIQLT ANELETHFMA GGNVPNVIKA LISADKANIA LTFKQATAID LAGRDVFEAV
QISVNPQVIN TPNVAAVAQD GIQLIAKARV TLRANIAQLV GGAGEETILA RVGEGIVTSI
GSSKSHKEVL ENPDKISKLV LQKGLDAGTA FEILSIDIAD IDVGANIGAK LQIDQANADL
KVAEAKAEER RAMAVASEQE MKSKAQEARA KVIEAEAEIP KSIAEAFRSG NLGIMDYYKM
KNIQADTGMR DSIAGGGKE