| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_3228 |
|---|
| Symbol | proS |
|---|
| ID | 4184753 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | + |
|---|
| Start bp | 3681190 |
|---|
| End bp | 3682665 |
|---|
| Gene Length | 1476 bp |
|---|
| Protein Length | 491 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 638073221 |
|---|
| Product | prolyl-tRNA synthetase |
|---|
| Protein accession | YP_679811 |
|---|
| Protein GI | 110639601 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0442] Prolyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00408] prolyl-tRNA synthetase, family I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.64525 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAAAG TATTACCAAA ACGCAGCGAC GATTATTCGT TATGGTATAA TGAGTTGGTA
AAAAGAGCCG ATTTAGCGGA GAACGCACCT GTACGGGGTT GTATGATCAT AAAGCCTTAC
GGCTATTCCA TATGGGAAAA AATGCAGGCT GTGCTGGACA AAATGTTTAA AGAAACAGGA
CATAGCAATG CATATTTTCC GTTGTTTATT CCCAAATCCT ATTTAAGTAA AGAAGCCTCT
CACATAGACG GCTTTGCGAA AGAGTGCGCG GTTGTTACAC ACTACCGTCT GAAAAATGAC
GAAAACGGAA AAGGCATTAT TGTTGATCCG GAAGCAAAAT TAGATGAAGA GTTAATTGTT
CGCCCAACAA GTGAAACGGT AATCTGGAAC ACCTATAAAA CCTGGATTCA GTCTCACCGC
GATTTGCCTC TATTGATCAA TCAATGGGCA AACGTTGTGC GCTGGGAAAT GCGTACCCGG
TTGTTTTTAC GTACAACAGA ATTTCTGTGG CAGGAAGGGC ACACCGCACA TGCAACAAAG
CAGGAAGCCA TTGTTGAAAC AGAACAAATG ATGAATGTAT ATGCAACGTT TGCGCAGAAT
TTCATGGCAT TACCGGTACA CCGCGGAATT AAATCGGCCA ACGAACGTTT TGCCGGGGCG
GAAGAAACGT ATTGCATAGA AGCTTTAATG CAGGATGGTA AAGCCTTGCA GGCGGGCACC
TCACATTTCT TAGGACAAAA TTTTGCCAAA GCGTTTGATG TAAAATTTGC ATCAAAAGAA
GGCAGCCTTG AATATGTATG GGGTACATCG TGGGGCGTAA GTACGCGTTT AATGGGCGCA
TTGATCATGG CACACTCGGA TGATGAAGGC TTGGTTCTAC CGCCATTGCT GGCACCTATA
CAGGTTGTTA TTGTTCCTAT ATTTAAAACA GCAGAACAAT TAGATCTGAT CGAGGCTACA
CTTAAACCAA TCCTTGCGGC ACTTAAGGCA AAAGATATCA GCGTTAAGTT TGACCATAGC
GATAAATATT CTCCAGGTTT TAAATTTGCA GAATACGAAT TAAAAGGTGT GCCGCTGCGC
GTTGCTATTG GTGCAAGAGA TATTGAAAAC GGAACAGTAG AACTTGCCCG ACGTGATACG
AAAGAAAAAA CAACTGTGCC TCAGGAAGGA TTAGCAGACA CCATTGAAAA GCTGCTGCAG
GAAATTCAGG AAAATATTTA TAAAAAAGCA TTCGCATACA GAGAAGCGAA CACATTTGTA
GCAGACGATT ATACCACCTT CAAAACAATG CTGGATGAAA CACCTGGCTT TATTTTAGCA
CACTGGGATG GTACACCTGA AACGGAAGAG AAAATTAAAG AAGAAACAAA AGCAACCATC
CGCTGTATCC CTCTTGATGT GACTTCTGAA CCAGGGATAT GTATGGTTAC AGGCAAGCCT
TCTGCTCAAC GTGTGTTATT TGCGCGCGCT TATTAA
|
|---|
| Protein sequence | MSKVLPKRSD DYSLWYNELV KRADLAENAP VRGCMIIKPY GYSIWEKMQA VLDKMFKETG
HSNAYFPLFI PKSYLSKEAS HIDGFAKECA VVTHYRLKND ENGKGIIVDP EAKLDEELIV
RPTSETVIWN TYKTWIQSHR DLPLLINQWA NVVRWEMRTR LFLRTTEFLW QEGHTAHATK
QEAIVETEQM MNVYATFAQN FMALPVHRGI KSANERFAGA EETYCIEALM QDGKALQAGT
SHFLGQNFAK AFDVKFASKE GSLEYVWGTS WGVSTRLMGA LIMAHSDDEG LVLPPLLAPI
QVVIVPIFKT AEQLDLIEAT LKPILAALKA KDISVKFDHS DKYSPGFKFA EYELKGVPLR
VAIGARDIEN GTVELARRDT KEKTTVPQEG LADTIEKLLQ EIQENIYKKA FAYREANTFV
ADDYTTFKTM LDETPGFILA HWDGTPETEE KIKEETKATI RCIPLDVTSE PGICMVTGKP
SAQRVLFARA Y
|
|---|
| |