Gene CHU_3227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3227 
Symbol 
ID4184752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3680023 
End bp3680916 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content38% 
IMG OID638073220 
Productredoxin family protein 
Protein accessionYP_679810 
Protein GI110639600 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1225] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCACC TTATTGCTAT TTGGTTATTG TTATTCTGTT TCTTTTTTTC CAGTGCAGAG 
AACACGCAAA CACAACTTGC GATAGGAGAT AAGGCACCGG ATTTTACGGT ACAGGATCAG
TCTGGGAAAC CACTTTCACT TTCATCGTTA AGAGGCAAGA TTGTATTGAT TAATTTCTGG
ACGGCCAGCT GCGAACCTTG CCGTCTGAAT CATCCTGACT TATATAGAAT TTACAACACC
TACAAAAGTT ATGGCTTTGA AGTTCTGAGT GTATCTCTTG ATACAAAAAA GGAAACGTGG
GTTAATGCAC TTAAAATGGA TCGCATCAAC TGGCCCAATA ATGGAATTGA TCTGCAAGGC
TGGAACAGTA AAGTTGTTAG CCTGTATGGA TTGAAAAGTA CACCCGGCAG TTTTTTGATC
AGTGAAGAGG GTAATATATT ACAAATCAAT CAGGATAAAA TTGCACTGGA ACAAACATTA
CATTATTTAA TTTTCGATCA GCCGCGTTTC TATCCGGTAG TAGCCAATAC AACCATTTAC
TTCAATGTTA TTTCGAAATA TAATATTGTT GACAGTAAAG GATACAGTGT ACTTAAAGGT
CGTGCAAAGG AAGTATCGGT TGCAGCACTT CCCCCGGGAG AATATACGCT GACGTATGAA
AATAAAACAG AAAAATTTCT TAAGGTACAA CCGGAGCAGA CTCCAATCAC GTTCTACCCG
ACACGCGTGG AAGATGAAAT AACGTTATCA AGAGAGGCAG ATTATTATAT TTATAACCAA
CGGGGAAAGC TTGAATTTAA AGGCAACGGC ACAACCATTG ATGTTAAAAA ATTGCCGCTT
GGCGTATATT ACTTATGTGT AGAAGGTACC ATTCATTCCT TTTTCAAGAA ATAA
 
Protein sequence
MKHLIAIWLL LFCFFFSSAE NTQTQLAIGD KAPDFTVQDQ SGKPLSLSSL RGKIVLINFW 
TASCEPCRLN HPDLYRIYNT YKSYGFEVLS VSLDTKKETW VNALKMDRIN WPNNGIDLQG
WNSKVVSLYG LKSTPGSFLI SEEGNILQIN QDKIALEQTL HYLIFDQPRF YPVVANTTIY
FNVISKYNIV DSKGYSVLKG RAKEVSVAAL PPGEYTLTYE NKTEKFLKVQ PEQTPITFYP
TRVEDEITLS READYYIYNQ RGKLEFKGNG TTIDVKKLPL GVYYLCVEGT IHSFFKK