| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_3220 |
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| Symbol | |
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| ID | 4184745 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 3669248 |
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| End bp | 3675190 |
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| Gene Length | 5943 bp |
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| Protein Length | 1980 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638073213 |
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| Product | hypothetical protein |
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| Protein accession | YP_679803 |
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| Protein GI | 110639593 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.782341 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAATTA CATTAAATAG CAGTTTGTCA TTAAGCAATG CGAATCTTAA TGGCTTAACC
ATTAATGGTT TTGTAGACGG AACAGCTGGT CCTGATGTAG TTATCAGAGG ATCTTCTGCA
TGTGGCCAAA GAGGTTTGGA CATAAATGGT TCACTTACCA ATATGAAGTT GTATGGGTTG
GTATTTCAAA GTTTAGAATA TGGTATTTAT TTTTCTGCAA ACGCCAGTGC AACAGTAAAT
GGAACAGTTA TTAAAGGATG CTATTTCGGA ACAGATATAA CAGGCACATC TATACAAAAC
GGAATTTGTA GATCAGGTAT TACATTGATA GGTGCTTCTT CAGTAACAAT TGGTGGTCCG
AATACAAATT TGGCAAATGG AGCCGCAAAT GCTGCAAACA ACTCTGAAAG ATGTTTGTTC
GGGGGAACAT GTAATATAGG TGATAATGGC CGTTATGGCG CAATTCAACT TCAAAAGGGT
TCAAACAACG TTTCTATTTT AAATAATTAT ATCGGTGTAA ACCTGGCAGG TACTACTGTA
TTACCAATCG GAAATCCAAC AAATAAAAAA GCGGTTACAC AAAATGGTAT TTCAATAGAT
GATGAACCAT CTTTCAATAC TATTATTTCA AATAACGTTA TATCCGGAGC GATTGGATCA
GGTATAAATA TATTTACCCG TGAAGATAGA CCTGCCTCAA ACGGGCATGT AATCACAGGT
AATATCATTG GTCTTAACCC TGATGGTACG TTAGGATATA ATGTTACTGC ACCGGCAAGT
TCTTTTGGAA ATCAGGCTTC AGGTATTTAT ATCAGAAACG CATCAAATGT TACAATAGGC
GGTAGCACTG CAGCAACACG TAACGTAATT TCAGCTAATG GTGGCGCAAC GCATACCTGG
CCGGATGCAA CCTGTTTTGC CTCATGGAAT GATTATAACC AGATCGCTGT GTATCTTGAA
TGGTGTACCA ACAGTAAAGT TTCCGGTAAT TACATCGGTA CAAATGCTGC AGGTACAAGC
AGCGGTATTG GTACCAATAA TATATTCGGA AACAGATCAG GCGGTATTAA AATTGTAGGT
GGTAGCACGG GCGCTAATAA CAATATTATC GGAGGTACAA ATCCAGGTGA AGGAAATGTT
ATCAGTGGTA ATGGTTATTT ATGGGGAACA TTTACAACAG GTTCCTGCGG TTCATTATCA
GGAATCTCTA CCGGCCACGG TATTGTATTA CAATATGCTG ATTGCAGAAA TACAAGCATT
TTAGGTAATT ATATTGGTTT AACAGCGGAT GGTGTTACAG GATTAGGAAA CAATACGTCA
GGGATAGATG TACAAGGGGC TTCAAACACT ACTATTGGTG GTGGGGCTGC AGGTGCAAGA
AATTATATTT GTAATAACCA GTTTGGTATA ACGTTACAGG AAGATTTTGA TGTACATAAT
GCGGCAACAA ATACAATTGT GGCAGGTAAT TACATCGGTT TAAATGTAAA CGCTGCTGCA
GTAGGAAATG GGGTGTCGGC TTCGTTTACT GAAGGTGCAG GTATTGTAAT ACAGAAAGGT
GCAAATACAA ACACAATCGG GGTATCTGTT GCAAATGGCG GAAACGTTAT TTCAGGAAAC
CGTACAGGCA TTATTATAAG AAACGCAGAA GGTGCCGGTT CTAATACGGG GCCCGCAAGA
ACAAATACAA TACAAAATAA TATCATTGGC TTAGATCCTA CAGGTACAAC TGCTATTCCG
AATACATCGG CTACGGCTGG TTATGGCTAT GGTATTGTTC TGGAAGTAGG TACAGGTTCT
GCAACAACAA CAATGCCTTA TGGTAATATT ATTGGCGGAA CAGGAACAAA TGAACCCAAT
ACGATTTCCG GCAATCAAAA AAGCGGAATA TATATAGGAA ACGGTACTGC TGTAACTGCA
GGTACTGCAA ACAGCATTAT AGGTAATAAT ATAGGTACAA ATAAAGCTGG TACAGCAGCT
GTTGCAAATG CGCTTCAGGG TATTGAAATC CTGAATGTAA GCAGAACAAC AATTACATCG
AACCTGATTT CAGGTAATAC GCAAAACGGT ATTTCATTAA CGGGATCTTC AACGAATACA
ATTCAGAACA ATACCATCGG AACAGCAGCT GATAAAACTG CACCGATACC AAACGGAGCA
AATGGTATTT TCCTGTCGGC TTCATCCGCC AATACCATTC AGGGTAATAC CATTGCAAGA
AATACATCTA ATGGTATTTC ACTTGCCGCA GGTTCTGCTA ATAACATTAT TGGAGGAATT
ACAGCATCCT TATCGAATAC TATTAATAAC AATGGCGGCA ATGGTGTTAT TGTAGATGGA
ATAGGTTCAA TTAAAAACTC CATTCATCAA AACTCCTTCA GCTGTAACAC AGCCAGAGGT
ATTGTGCTTT CCAATGGTGG TAACGGAGGC TACGCTGCCC CTTCAATTAC AGGTACTCCA
ACACAAATTA CCTGGACGGG CGGAACATTC ATTGAAGTTT ATGAAACGGA CGGGTGTGCA
ACATGTCCGG CAGGCGCAGC ACGTTTACAG GGTAAAAAAT TAGTAGGTTC CGGGCCTTCT
CCTTATGTAT TTAATGCTGC TGAAGGGTTT GACAAAACTA AAACCTACAC GGCAATTGCT
CATGAAGCGA ACGCGACAAC GGCACACAAC TCGTCTGAAT TTTCTCAGTG TTACACGCTT
TGTCAGGATG CAGCCACAGT AACCGTTACA GGTGCTCCGT TAACCTTCTG TGAAGGAGGA
TCCGTAACAT TAACAGCTAC TGTTACAGGC GGTACAGGAA CTCCGTCATA TGTATGGAAC
AGAGGCGGCG TAGCTATCAG CGGTGCTACT GCAAGTACCT ATACGGCATC GGTTTCCGGT
TTATATACAG TAACCTATTC TTCAACTACA ACCTGTGGGC CAACAACTTC AACAGGAGTT
ACGGTTACGG TTAACAACAA CCCGGTTGTT TCAAACCAGG CAGCAGTAAC TATTTGCAGC
AATTCAGCAT TTACTGTAAC ACCAACAGGT GCCGGCACCG GAACAACCTA TACATGGACT
GCACCTTCAA TCACGGGAGG AATAACAGGC GGCTCTGCGC AAAATACGGA TCAGACTTCT
ATCAGTCAGA CATTGGTAAA CCCTGGTACG TCGGCCGGAA CAGCGGTTTA TACCGTAACA
CCTAAATCCA GCGCTGGTTG TTCGGGTGCA ACATTTACAG TAACAGTTAC TGTTCAACCG
GTTGCAGCTG TAACAACAGC AAACCCTGCG GCTATCTGTT CTGGTCAGAC AACAGCCATT
AGCTTAACCT CTTCTACTGC ATCGGCAACA TTTGCATGGA CATTAGGCAC CGTTACAGGA
ACGGTTTCCG GTCAGGCGGC AGGCAGCGGA GCAAGCATCG CTCAAACATT GATAAACAGC
GGAACAGGCA TTGCTACTGT TCAATATAAT GTTGTTCCAT CAGCAGGTAC ATGTCCGGGT
ACACCTAAAA CAATTACAGT TACGATTAAT CCGGTAGCTG CACTAACAAC AGCCAATCCT
TCTGCGATCT GTTCTGGTCA GACGACAGCT ATAAGCTTAA CATCTGCTAC ACCATCTGCA
ACATATGCAT GGACACTAGG TACTGTAACA GGTAGCGTAA GCGGACAGGC AGCTGGAAGC
GGAACAAGTA TCGCACAAAC ACTAACAAAC AGCGGAACAG GTATTGCTAC CGTTGAATAT
GTTGTTGTTC CATCAGCAGG TACATGTCCG GGTACACCGA AGACAATTAC TGCAACCATT
CATCCGGTTA CAGTTATTAA TACAACAGAC CCTGCGGCAA TTTGTTCAGG TGGTACAACA
GCGATCAGCT TAACATCTAC TACACCATCT GTAACATTTA CATGGACACT AGGAACTGTA
ACAGGTAGTG TAAGCGGCCA GGCAGCCGGA AGCGGAGCAA ATATTGCACA AACATTAGTA
AACAGCGGAA CGGGTGTAGC AACGGTTCAA TATATCGTTG TTCCTTCATC CGGTGTATGT
CCGGGCACAG CAAAAACAAT TACAGCTACC ATTAATCCGG TTACTAAACT TACAACTGCA
GATCCTGCAG CAATTTGTTC CGGAGAGACA ACAGCTATCA GCTTAACATC TTCTACGGCT
TCTGCTACTT TCACATGGAC ACTTGGAGCG GTAACAAATG TTCAGGGACA AGTTGCGGGA
AGTGGCTCAA GCATTTCTCA GCAATTAACA AACAATACAC TTAATGCTGG TTCTGTTGAA
TATATTGTTG TTCCGTCATT TGATGGTTGT GCAGGTACTG CAAAAACCAT AACGGTTACT
GTTAATCCAA ACCCAACGTT AACAACGGGT GATCCTGCAG CTATATGCTC CGGCGAAACA
ACTGCAATAA GCTTAACATC AGCTCCGGCT TCAGCTACAT TTGTATGGGT ACTTGGTACG
GTAACAAATG TAACAGGTGC AGCTGGCGGT TCCGGATCTT CTATTAACCA GACACTGGCA
AATGCTACAT TGACTGTAGG AACAGTTGAA TACATTGTAA AACCAACATT AGGTACCTGC
GCAGGATCTG ATAAGAAAAT TACGGTTACG GTGAATCCAA AACCAGTAGT TTCTAACACG
AATCCAGCAG ATATCTGCTC AGGAGAAACA ACAGCTATCA CCTTAGCTTC TACGCCTTCT
TCTGCAACAT TTACATGGAC AATCGGAAAT GTAACAAATG TTTCAGGACA GTCAAATGGC
AGCGGCTCTT CAATTAATCA AACATTGGAA AATTCAACTG CTTCAGCAGG ATCTGTTGAA
TATATTATCG TTCCTTCCTT AACAGGATGC CTGGGTGATG CTAAAACAAT TATTCTAACA
GTAAATCCTA AGCCGGTAGT TACAATTACT CCTTCGGTCC CAACTGCAAT TTGTTCTACA
GACTCGGTTG ATTTAGCAGC GAATGCTACA GGTTTCACAG GCGGTACATA TACCTGGTAT
AAAGAAACTG TAAATTATGG CATTGAAAAT CCGCTTAGAG TAAAAGAAGA GGGTACATTC
CATGTTATCT ATACAGCCGC AACTTCCTGT TCAAGTTTAC CTTCAGCAAG CATCACGGTT
ACGTTCAACC CGGATAACAG CGAAGCTTTT GCGTATGATA CTTCTCTTAC TACGTGTCTG
GATCAGTTAG TATTGGCGGG AAGCAAACCT GAGTATGGTA CTCCTCAATG GACCATTTAC
TCACCTAACC CGACAAATGC ATCTCTTGTA GCAGGAACTT CATTGGATTC CGTTACAGTA
ATTGATCTGG AAGATGGCGT AGATTATAAA TTCCTCTATA AAGTGTCAGG TGCGTGCGGT
ATTGATAAAA CAGACACGGT GTTTGTTTCC GTAGGTATAG ATGACTTTGA CCTGACGGCA
TCAGGCCCTA CAGATACACT TTGTGTAAAA ACAAACAGAG TATTAACGGC AACAGTTATT
GGTTCCGGCG GTTCAGGCAA CTATAACTAT GTATGGGCAG GAAGTGATGG ATCATATATA
ACGACAAAAT CTCCAACAAT AACAATCAAC CCGACACAGG CAACAACAAC ATATGTTGTA
TATGTAGAGG ATATCAATAA GCTTGGGTGT AAAGCGCAAG CTATAACACC GGTAGTTGTT
CATTCAGTAG AAAGTCAGAA CTTATACATT CCGAATTTAA TTACACCAAA CGGCGACAAT
AAAAATGATG TATTCTACCT TGCTGACAGA TCATTCTATC CTCCGATGCC AATGATTTCA
GAAGGTTCTC ACCTGGAAGT TGTGAACCGT TGGGGATCTA AAGTATTCGA AGCTGACAAT
TACAAAAATG ATTGGGATGC CAAAGAGTTA ACAGATGGTA TTTATTATTA CCACATTACT
TCTTCATGCG GCAACAAAGA ATATAAGAGC TGGATACAAA TCTTAGGAAA TACGAACAAC
TAA
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| Protein sequence | MTITLNSSLS LSNANLNGLT INGFVDGTAG PDVVIRGSSA CGQRGLDING SLTNMKLYGL
VFQSLEYGIY FSANASATVN GTVIKGCYFG TDITGTSIQN GICRSGITLI GASSVTIGGP
NTNLANGAAN AANNSERCLF GGTCNIGDNG RYGAIQLQKG SNNVSILNNY IGVNLAGTTV
LPIGNPTNKK AVTQNGISID DEPSFNTIIS NNVISGAIGS GINIFTREDR PASNGHVITG
NIIGLNPDGT LGYNVTAPAS SFGNQASGIY IRNASNVTIG GSTAATRNVI SANGGATHTW
PDATCFASWN DYNQIAVYLE WCTNSKVSGN YIGTNAAGTS SGIGTNNIFG NRSGGIKIVG
GSTGANNNII GGTNPGEGNV ISGNGYLWGT FTTGSCGSLS GISTGHGIVL QYADCRNTSI
LGNYIGLTAD GVTGLGNNTS GIDVQGASNT TIGGGAAGAR NYICNNQFGI TLQEDFDVHN
AATNTIVAGN YIGLNVNAAA VGNGVSASFT EGAGIVIQKG ANTNTIGVSV ANGGNVISGN
RTGIIIRNAE GAGSNTGPAR TNTIQNNIIG LDPTGTTAIP NTSATAGYGY GIVLEVGTGS
ATTTMPYGNI IGGTGTNEPN TISGNQKSGI YIGNGTAVTA GTANSIIGNN IGTNKAGTAA
VANALQGIEI LNVSRTTITS NLISGNTQNG ISLTGSSTNT IQNNTIGTAA DKTAPIPNGA
NGIFLSASSA NTIQGNTIAR NTSNGISLAA GSANNIIGGI TASLSNTINN NGGNGVIVDG
IGSIKNSIHQ NSFSCNTARG IVLSNGGNGG YAAPSITGTP TQITWTGGTF IEVYETDGCA
TCPAGAARLQ GKKLVGSGPS PYVFNAAEGF DKTKTYTAIA HEANATTAHN SSEFSQCYTL
CQDAATVTVT GAPLTFCEGG SVTLTATVTG GTGTPSYVWN RGGVAISGAT ASTYTASVSG
LYTVTYSSTT TCGPTTSTGV TVTVNNNPVV SNQAAVTICS NSAFTVTPTG AGTGTTYTWT
APSITGGITG GSAQNTDQTS ISQTLVNPGT SAGTAVYTVT PKSSAGCSGA TFTVTVTVQP
VAAVTTANPA AICSGQTTAI SLTSSTASAT FAWTLGTVTG TVSGQAAGSG ASIAQTLINS
GTGIATVQYN VVPSAGTCPG TPKTITVTIN PVAALTTANP SAICSGQTTA ISLTSATPSA
TYAWTLGTVT GSVSGQAAGS GTSIAQTLTN SGTGIATVEY VVVPSAGTCP GTPKTITATI
HPVTVINTTD PAAICSGGTT AISLTSTTPS VTFTWTLGTV TGSVSGQAAG SGANIAQTLV
NSGTGVATVQ YIVVPSSGVC PGTAKTITAT INPVTKLTTA DPAAICSGET TAISLTSSTA
SATFTWTLGA VTNVQGQVAG SGSSISQQLT NNTLNAGSVE YIVVPSFDGC AGTAKTITVT
VNPNPTLTTG DPAAICSGET TAISLTSAPA SATFVWVLGT VTNVTGAAGG SGSSINQTLA
NATLTVGTVE YIVKPTLGTC AGSDKKITVT VNPKPVVSNT NPADICSGET TAITLASTPS
SATFTWTIGN VTNVSGQSNG SGSSINQTLE NSTASAGSVE YIIVPSLTGC LGDAKTIILT
VNPKPVVTIT PSVPTAICST DSVDLAANAT GFTGGTYTWY KETVNYGIEN PLRVKEEGTF
HVIYTAATSC SSLPSASITV TFNPDNSEAF AYDTSLTTCL DQLVLAGSKP EYGTPQWTIY
SPNPTNASLV AGTSLDSVTV IDLEDGVDYK FLYKVSGACG IDKTDTVFVS VGIDDFDLTA
SGPTDTLCVK TNRVLTATVI GSGGSGNYNY VWAGSDGSYI TTKSPTITIN PTQATTTYVV
YVEDINKLGC KAQAITPVVV HSVESQNLYI PNLITPNGDN KNDVFYLADR SFYPPMPMIS
EGSHLEVVNR WGSKVFEADN YKNDWDAKEL TDGIYYYHIT SSCGNKEYKS WIQILGNTNN
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