| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_3217 |
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| Symbol | atoS |
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| ID | 4184742 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 3665336 |
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| End bp | 3667513 |
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| Gene Length | 2178 bp |
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| Protein Length | 725 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 638073210 |
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| Product | two-component sensor histidine kinase |
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| Protein accession | YP_679800 |
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| Protein GI | 110639590 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.672415 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGAAAA GCAATAGTGA ATATATTACC TTATATATTA ATAAATCAGG TATTTGTAAA
CGCTTTGATT CAAACGTAAG CACGTTTAAT TCAATACAAA ATTTTGAAAA AATTGTTGGC
GCAAACCTGA AAGAGATCTT TTATAAAGAA ATTTTCAGCG CGCCGATTTT AGATTGGTTT
ACAAAGGTTA ATGCAGATTT TTCAGAACTG CTGATTGAAG ATACATTCAT TCATTACATC
GTTACTTTAC AGCCCTTAAA AGAAGCAGAC ACTGCTGCGA TCATTACACT GCATACTTCT
GAGATTTCTA AACAAATCGA CATATTAAAA TACAAATATG AAGGCACGTT AGAAAATTCA
AATGTTGGGT TGTGGTTATG GTTTAATCTG GAAGAAGATC AGGCATGGTG GTCTCCTTCT
TTTTTAAAAT TACTGGGATA TGAAAATGAC AACGTAAAAA CAAGCATGCA GCTTTTCATG
CAACTGATTC ATCCGGAGCA ATTGGAAGAT TTTAAAAATC GCATGAAGAA TTTTTATCGT
TCAACAGATG TTTCAGCACA GCCGTATAAC AGCGTTGAAT TTAAAATGCG GAAAAAGAAT
GGTGAATATT TAGATTTATT ATTCTCTTCC CGGCAGATCA AAAATGCCGC AGGTAAAATC
ATAAAATTCT CCGGTACTGT AATTGATATT AATAAATTAA AATCAGTAGA GAAAAAATTA
AGTGAAAGTG AATCCAGATT GGAGCTGGCG TTAGAAGCGG CAAACATGGG TACATGGTCG
TGGAATATAA AGCGAAATGA AATTTTCTGG TCTGAGCAGG TACTCTATAT ATTTGGTATT
AAGCCGGAAG AATTTAAAGG GGATTTTGAA AGTTATCTGA ATTTAATTCC TTCAAACGAA
CGGGTACAGG TAGAAGAGTA CATTACAAAT GTGCTGGCGA AACTGCAGAA AGAATTCTTT
TTCGACCACT CTATTCAAAC GCCATCCGGC GTGAAGAAAC GCGTGTATTG CAAAGGCAAG
CTTTATGCAG ACCATGCCGG TATGCCCGAT AGCATGACAG GCGTTGTGCT GGATGTAACA
CAGGAAAATG AATTAAAATA TTTATTAGGC CAGACAACAG AACGGTATAA GTCTGTGATC
GAATCCATGA TTGAAGGTAT CATCATTATT GATCTGGAAG GAAAAATTAT TGATCACAAT
AAAGCCGCTA CTCAGATTAT TGGTTATGAA GATCTGGTGT TAATTGGAAA TGATTTTTCA
TTAGGCCCCG GTGAAGCTAT CCGGGAAGAT GAAACAAAGT TTCCATTCGA AGAATTTCCC
GGAATCAAAA CATTGCGTAC CGGAATGCCC TACAAAAATG TTATACTTGG GTGGATCATT
CCCGGTAAGG ATACAATTTG GCTGAGCATT AATTCAGAGC CTGTGAAAAA TGAAAACGGT
GAACAGGTTG CTGTTGTCTG CTCGTATTCA GATGTAACAG AAAGGCAGGT TTATCTGCAT
ACATTAAAAG TAAAAAACAG GCAGCTCGAA GATTTCGCGC ACATTACATC TCATAATTTA
CGTTCACCAA TCAGCAATCT CAGTGTTTTA TTAGACTATT ATGAAACATC AAAAATTGAC
GCAGAAAAAG AAGATTATTT TTCAAAGCTA AAACATGTTT CAGCAAACTT ATTGAGTACC
ATTCAGGTAT TGGCAGACTC GCTTAAAATA CAAAAAGATT TTATTGATGA TGAAGATGAT
GTTTCCTTTC AGGAAATTTT TGATACCGTT TCAAACTTAT TGTATGGAAA TATTCAGGAG
TCGGCAGTAA TGTTCAGAAT TGATTTTTCT AAATGCAACC AGGTATATTA TTCCCCAACG
TATTTGCAGA GTATTTTTAT AAATCTGATT TCTAATGCCA TTAAATATCG GGCAACTGAC
CGCAAACTAA TCGTTCACAT CGAAACAGAA ATTTCTGAAA AAGGTAACGT GCTGCTTAAA
TTTTCGGACA ATGGTATTGG AATTGATCTT GAAAAACATC AGCATAAAAT ATTTGGTTTA
TATAAAACCT TTCATGCGAA TAAAGATTCA AGAGGAGTAG GTTTGTATAT GACCAAACGC
CAGATTGAGA CGATGGGCGG TTCTATTGAG GTTACAAGTA AAGTGAATGT TGGAACAACA
TTCACCATTA AATTTTAA
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| Protein sequence | MQKSNSEYIT LYINKSGICK RFDSNVSTFN SIQNFEKIVG ANLKEIFYKE IFSAPILDWF
TKVNADFSEL LIEDTFIHYI VTLQPLKEAD TAAIITLHTS EISKQIDILK YKYEGTLENS
NVGLWLWFNL EEDQAWWSPS FLKLLGYEND NVKTSMQLFM QLIHPEQLED FKNRMKNFYR
STDVSAQPYN SVEFKMRKKN GEYLDLLFSS RQIKNAAGKI IKFSGTVIDI NKLKSVEKKL
SESESRLELA LEAANMGTWS WNIKRNEIFW SEQVLYIFGI KPEEFKGDFE SYLNLIPSNE
RVQVEEYITN VLAKLQKEFF FDHSIQTPSG VKKRVYCKGK LYADHAGMPD SMTGVVLDVT
QENELKYLLG QTTERYKSVI ESMIEGIIII DLEGKIIDHN KAATQIIGYE DLVLIGNDFS
LGPGEAIRED ETKFPFEEFP GIKTLRTGMP YKNVILGWII PGKDTIWLSI NSEPVKNENG
EQVAVVCSYS DVTERQVYLH TLKVKNRQLE DFAHITSHNL RSPISNLSVL LDYYETSKID
AEKEDYFSKL KHVSANLLST IQVLADSLKI QKDFIDDEDD VSFQEIFDTV SNLLYGNIQE
SAVMFRIDFS KCNQVYYSPT YLQSIFINLI SNAIKYRATD RKLIVHIETE ISEKGNVLLK
FSDNGIGIDL EKHQHKIFGL YKTFHANKDS RGVGLYMTKR QIETMGGSIE VTSKVNVGTT
FTIKF
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