| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_3215 |
|---|
| Symbol | |
|---|
| ID | 4184740 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | - |
|---|
| Start bp | 3663654 |
|---|
| End bp | 3664616 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 638073208 |
|---|
| Product | 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1, 4-benzoquinol methylase |
|---|
| Protein accession | YP_679798 |
|---|
| Protein GI | 110639588 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.409549 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.479491 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTGAAT TAATTGATCC CATTTCAAAA CAGCGTCTGG AAGAATCACC TGAGGGGTTA
AGAAATGAAA ATGGAATAGT TGTATATCCT TTAATAAACG GAGCATATAG AGTAGCGGCA
AGCGATAATT ACACATCCAA TTTTGGCCTC GAATGGAATA CCTTTCAAAA AACACAAATA
GATAAATTTT CAGGGAACAC CGTTTCAGAA GAACGATTAT TTGCACAAAC AAACTGGCAA
AAGAATGGTT TGGAAGGAGA AACAATTTTA GAAGTGGGAA GCGGAGCCGG CAGGTTCAGT
CAGATTATGC TGGATCATAC AAAAGCAACG CTTTATTCGG TTGATTATTC GGAAGCCGTT
GAAGCAAACT ATAGAAATAA CGGACCGCAT GAACGCTTTA AATTATTTCA GGCAAGCATT
TACGAATTGC CATTCAAACA GGCATCTTTT GATCGTGTTA TATGTTTGGG AGTATTACAG
CATACCCCCG ATTTTAAAGC ATCGGTAAAA GCGCTGGTGG AGATGGTGAA ACCAGGCGGA
GAATTAGTCA TTGATTTTTA TCCGATCCGG AATGTATTTA CCAAAGTACA CGGGAAATAC
CTGCTTCGCC CGATCTTAAA AAGAGTTAAT CACCACAGAT TAATGTCGCT CATCCGTAAC
AACATTGATT TTTTAATTTC CATTTACACA TTCAACAGGC GCATTGGCTT GGGCGTATTT
AACCGCTTTG TACCGATCTG TGAGATTGAA CGTACCTTGC CTAAAGGTAT GACGCCTGAG
CAGTTAAAAG AGTGGATCAT ACTGGATACG TTTGATATGT TCAGTCCGGA ATACGATCAG
CCGCAGCGCC TTTCAACAGT GGCTAAGTGG GTGAAAGAAT TCGGGATGGC TGATGTGGAT
GCCTCGTGGG TAACGTATCA TGGAAAGCTG GAAGCGCCGA CGGTTAGGGG TAGGAAGGTG
TAA
|
|---|
| Protein sequence | MIELIDPISK QRLEESPEGL RNENGIVVYP LINGAYRVAA SDNYTSNFGL EWNTFQKTQI
DKFSGNTVSE ERLFAQTNWQ KNGLEGETIL EVGSGAGRFS QIMLDHTKAT LYSVDYSEAV
EANYRNNGPH ERFKLFQASI YELPFKQASF DRVICLGVLQ HTPDFKASVK ALVEMVKPGG
ELVIDFYPIR NVFTKVHGKY LLRPILKRVN HHRLMSLIRN NIDFLISIYT FNRRIGLGVF
NRFVPICEIE RTLPKGMTPE QLKEWIILDT FDMFSPEYDQ PQRLSTVAKW VKEFGMADVD
ASWVTYHGKL EAPTVRGRKV
|
|---|
| |