Gene CHU_3213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3213 
Symbol 
ID4184738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3660738 
End bp3661826 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content35% 
IMG OID638073206 
Productcell wall anchor protein 
Protein accessionYP_679796 
Protein GI110639586 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0205572 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0928612 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGT GTGTTAAAGC AATTATAATA GTACTGGCAT TTTTGCAGGT ATCTAATGTG 
TTTTCTCAAA TTTGGTTAGG AGGCCCCGGA GCTAGTGATG TTACATGGCG TACTGGCTCT
ACTAATATGC AGGGAAATAC CACAATTGGT ATGTCAACAA CCAGTGCTTC TAAATTACAT
ATCTATAATT CAACAGCTAA TTCACAATTG GCAATTTCAG GGCCAAGTCC AGGAATTAAA
TTTAATTTTG GTACAGATCC CTCTGAGTTA GCAGCAGATA GAGCAACCAT TGGTTTAGTA
AGTACTGCTG CTAATTATTT TTCTACTTCT AGTGTAAATG ATTTTATTAT CAGAAATGGT
GCAAGTGGTT CTATTTTATT TGGAGGTTCT TCTGAAAAGA TGCGAATTTC GAATAATGGA
TTCATTGGCA TGGGAATTAC AGCTCCATCA TCATTATTGC ATATTCAAGG AGGAAATTTT
CAAATAACAA ATTCCAATGT TGCACCTGAT ATGAGCAAAA GCGGCCTTAC TATGGGTGTA
ATTGGAACGA CAACAGCAAA TACTTCAACA GATTATTCCT GGATTCAGGC GTCTTCTGGA
CCGTTGCTCT TAAATCCTAA AAGTCTTAAT GATCTTACAG GAACAACGAA TACAAATAAT
TTTGTCGGTA TTGGTTTTGA AAAATCAAGC ATAACATCTT TGGGTACAAT TCCCGCAGGT
TACAATTTGT TGGTACGCGG AAAAATTTTG TGTGAAGAAC TAAAAATTAA ATTGAAAACA
GGATCAACCT GGTATGATCA TGTTTTAAAG CCTGATTATA AATTAATGTC ATTGGATTCT
CTGGAATTGT TTATCAATGA AAATAATCAT TTACCTGATA TTCCAAGCGA AGCAGAAGTT
AAAGAGAATG GTATCATGGC AGGAGAAATG AATGGCTTAT TGCTAAAGAA AGTAGAAGAG
TTAACACTTT ACGTGATTGA GCAGAATAAA GCCACAGTAA TTCAGGCAGA GCAGATTGAA
TTGTTAAAAA AACAAAATGA ATTACTTATA CAGCAGATGC AATTGCTAAC GGGTAATAAA
ATAAAATGA
 
Protein sequence
MKKCVKAIII VLAFLQVSNV FSQIWLGGPG ASDVTWRTGS TNMQGNTTIG MSTTSASKLH 
IYNSTANSQL AISGPSPGIK FNFGTDPSEL AADRATIGLV STAANYFSTS SVNDFIIRNG
ASGSILFGGS SEKMRISNNG FIGMGITAPS SLLHIQGGNF QITNSNVAPD MSKSGLTMGV
IGTTTANTST DYSWIQASSG PLLLNPKSLN DLTGTTNTNN FVGIGFEKSS ITSLGTIPAG
YNLLVRGKIL CEELKIKLKT GSTWYDHVLK PDYKLMSLDS LELFINENNH LPDIPSEAEV
KENGIMAGEM NGLLLKKVEE LTLYVIEQNK ATVIQAEQIE LLKKQNELLI QQMQLLTGNK
IK