Gene CHU_3211 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3211 
Symbol 
ID4184736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3659617 
End bp3660150 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content30% 
IMG OID638073204 
Producthypothetical protein 
Protein accessionYP_679794 
Protein GI110639584 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2825] Outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.00229754 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.155539 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA ATGTTTTGTT TTTTACCGGG CTCTTAGTTG CTATTTTAAT TTCTATAATT 
ATTTATTTGA TTGTTAGAAA ACCTGTACAC GATAAAGATA TTTATTTTGT TGAAACAGAT
AAAGTTTTTA ACGAATACAA TGGCACAAAG CTTATTAAAA ATAACTTAAT AAAAAGACAA
GAGATCCAGA AACGAGTTAT GGATTCTATG TTGGCGGAAA TTCAGGTAAG AGAGTCCGGA
ATAAATATTT CTAGCTTGAA TGAAGAACAA AAAGTTGCTT TTTTAGCAAA ACGGAATGCT
TACACTCGGT TGATGAAAGA ATACCAGGAA AAAAATGAAG ACGAATTTCA ACAATCACAA
CAGGCATTGT GGATTCAGAT TAATCAATAC ATTAAAGATT ACGGGACTGA AAATAAGATT
GTATATATAT TAGGTGCAAA TGGCACTGGT AATTTAATGT TTGCAGACAC AAGTTATAAT
ATAACAAAAC CTGTTGTCGA GTACATCAAT ACTAGATTCG AAGGCAAACA TTGA
 
Protein sequence
MKKNVLFFTG LLVAILISII IYLIVRKPVH DKDIYFVETD KVFNEYNGTK LIKNNLIKRQ 
EIQKRVMDSM LAEIQVRESG INISSLNEEQ KVAFLAKRNA YTRLMKEYQE KNEDEFQQSQ
QALWIQINQY IKDYGTENKI VYILGANGTG NLMFADTSYN ITKPVVEYIN TRFEGKH