Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_3211 |
Symbol | |
ID | 4184736 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 3659617 |
End bp | 3660150 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 638073204 |
Product | hypothetical protein |
Protein accession | YP_679794 |
Protein GI | 110639584 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2825] Outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.00229754 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.155539 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAA ATGTTTTGTT TTTTACCGGG CTCTTAGTTG CTATTTTAAT TTCTATAATT ATTTATTTGA TTGTTAGAAA ACCTGTACAC GATAAAGATA TTTATTTTGT TGAAACAGAT AAAGTTTTTA ACGAATACAA TGGCACAAAG CTTATTAAAA ATAACTTAAT AAAAAGACAA GAGATCCAGA AACGAGTTAT GGATTCTATG TTGGCGGAAA TTCAGGTAAG AGAGTCCGGA ATAAATATTT CTAGCTTGAA TGAAGAACAA AAAGTTGCTT TTTTAGCAAA ACGGAATGCT TACACTCGGT TGATGAAAGA ATACCAGGAA AAAAATGAAG ACGAATTTCA ACAATCACAA CAGGCATTGT GGATTCAGAT TAATCAATAC ATTAAAGATT ACGGGACTGA AAATAAGATT GTATATATAT TAGGTGCAAA TGGCACTGGT AATTTAATGT TTGCAGACAC AAGTTATAAT ATAACAAAAC CTGTTGTCGA GTACATCAAT ACTAGATTCG AAGGCAAACA TTGA
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Protein sequence | MKKNVLFFTG LLVAILISII IYLIVRKPVH DKDIYFVETD KVFNEYNGTK LIKNNLIKRQ EIQKRVMDSM LAEIQVRESG INISSLNEEQ KVAFLAKRNA YTRLMKEYQE KNEDEFQQSQ QALWIQINQY IKDYGTENKI VYILGANGTG NLMFADTSYN ITKPVVEYIN TRFEGKH
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