Gene CHU_3190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3190 
Symbol 
ID4186116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3629099 
End bp3629917 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content35% 
IMG OID638073183 
Producthypothetical protein 
Protein accessionYP_679773 
Protein GI110639563 
COG category[S] Function unknown 
COG ID[COG2849] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.00644171 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTTTCTC AAAAAAGATA TTCTATGTTA AAAAACAATA AATATATATT CATACTCTAT 
AGTACTTTAG TTGCATTGAT CTGTTCGGTC AATGTGCATG GGCAAACGGT TAAAGATTTT
TCGGTCGCTA ATACCAACAG AGTATATGTA CAATATACGG ATAGCACCGT AGAAGCTTTC
TGCTACAGAG GAGACAAAAA TATAAAGACA CAGGATAACC TGTTCTATTA TTGGTATGCT
GCACAGCAAA TAAAACATAC ACGCGGCGGA TATGAAGGAA AGATTCTGCA TGGCACATAC
ACAATGTTTT ACTACAATAA AGATTTACTC GCAAAAGGTA ATTTTAAATA TGGGCTGAAA
CATGGAGAAT GGAAAAGCTG GCATCAGGGC GGAGAGATTA AAAGCAAAGA AAAATGGAGA
AAAGGTGTGC TCGTTGGAAA AGCATATTAT TATTCAAACA AAGGACGCAT CCAAAGAGAA
CGAAATATAA AACCCACGTC TGGCAATGGT TATATAGTAT ATTACGGCGA AGACGGGATT
CTTACATCTA AAAGCATTTA TAAGAATAAT ACGGTAAGTA AAGAAATCAA TTATCAAAAA
AATGACAAGG GTAAGTTGGT TGAAGTAAAA CCAGAAAAAG TAAAATCAGA AAAGGAGAAA
ACCCAAAAAG GGAAATCTAA AAAAGAGAAA TCCAAAAACG GAAGCAAAGA AGAGAATAAA
CAAAAGACAG AAAAGCCTGT CAGGGAAAAG AAACAAAAAG TACCCAAAAT AAAAATTCAG
AAATACAGGC AGATTTCTCC CGGAGGAATC GGAGCCTGA
 
Protein sequence
MFSQKRYSML KNNKYIFILY STLVALICSV NVHGQTVKDF SVANTNRVYV QYTDSTVEAF 
CYRGDKNIKT QDNLFYYWYA AQQIKHTRGG YEGKILHGTY TMFYYNKDLL AKGNFKYGLK
HGEWKSWHQG GEIKSKEKWR KGVLVGKAYY YSNKGRIQRE RNIKPTSGNG YIVYYGEDGI
LTSKSIYKNN TVSKEINYQK NDKGKLVEVK PEKVKSEKEK TQKGKSKKEK SKNGSKEENK
QKTEKPVREK KQKVPKIKIQ KYRQISPGGI GA