Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_3190 |
Symbol | |
ID | 4186116 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 3629099 |
End bp | 3629917 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 638073183 |
Product | hypothetical protein |
Protein accession | YP_679773 |
Protein GI | 110639563 |
COG category | [S] Function unknown |
COG ID | [COG2849] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.00644171 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTTTTCTC AAAAAAGATA TTCTATGTTA AAAAACAATA AATATATATT CATACTCTAT AGTACTTTAG TTGCATTGAT CTGTTCGGTC AATGTGCATG GGCAAACGGT TAAAGATTTT TCGGTCGCTA ATACCAACAG AGTATATGTA CAATATACGG ATAGCACCGT AGAAGCTTTC TGCTACAGAG GAGACAAAAA TATAAAGACA CAGGATAACC TGTTCTATTA TTGGTATGCT GCACAGCAAA TAAAACATAC ACGCGGCGGA TATGAAGGAA AGATTCTGCA TGGCACATAC ACAATGTTTT ACTACAATAA AGATTTACTC GCAAAAGGTA ATTTTAAATA TGGGCTGAAA CATGGAGAAT GGAAAAGCTG GCATCAGGGC GGAGAGATTA AAAGCAAAGA AAAATGGAGA AAAGGTGTGC TCGTTGGAAA AGCATATTAT TATTCAAACA AAGGACGCAT CCAAAGAGAA CGAAATATAA AACCCACGTC TGGCAATGGT TATATAGTAT ATTACGGCGA AGACGGGATT CTTACATCTA AAAGCATTTA TAAGAATAAT ACGGTAAGTA AAGAAATCAA TTATCAAAAA AATGACAAGG GTAAGTTGGT TGAAGTAAAA CCAGAAAAAG TAAAATCAGA AAAGGAGAAA ACCCAAAAAG GGAAATCTAA AAAAGAGAAA TCCAAAAACG GAAGCAAAGA AGAGAATAAA CAAAAGACAG AAAAGCCTGT CAGGGAAAAG AAACAAAAAG TACCCAAAAT AAAAATTCAG AAATACAGGC AGATTTCTCC CGGAGGAATC GGAGCCTGA
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Protein sequence | MFSQKRYSML KNNKYIFILY STLVALICSV NVHGQTVKDF SVANTNRVYV QYTDSTVEAF CYRGDKNIKT QDNLFYYWYA AQQIKHTRGG YEGKILHGTY TMFYYNKDLL AKGNFKYGLK HGEWKSWHQG GEIKSKEKWR KGVLVGKAYY YSNKGRIQRE RNIKPTSGNG YIVYYGEDGI LTSKSIYKNN TVSKEINYQK NDKGKLVEVK PEKVKSEKEK TQKGKSKKEK SKNGSKEENK QKTEKPVREK KQKVPKIKIQ KYRQISPGGI GA
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