| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_3180 |
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| Symbol | ispF |
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| ID | 4186106 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 3620873 |
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| End bp | 3621352 |
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| Gene Length | 480 bp |
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| Protein Length | 159 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638073173 |
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| Product | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
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| Protein accession | YP_679763 |
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| Protein GI | 110639553 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
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| TIGRFAM ID | [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 54 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.780002 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAATTA AAGTAGGTTT CGGATACGAC GTTCACCAAT TAAAAGAAGG CAGACCCATG
TGGCTTGGTG GTATTCAGCT TGAATATACA AAAGGCCCGG ACGGCCACTC CGATGCCGAT
GTATTGATCC ATGCTATCTG TGATGCAATT TTAGGTGCAG CAAACATGCG CGACATCGGT
TTCCATTTTG CAAATACCGA CGATCGTTGG AAAGGTGTGG ATTCTAAAGT CCTGCTGAAA
GAAGTATGCC GCATGATCCG CGAAAAAGGC TGGGAGATCA GCAACGTAGA TGCTTCCCTT
GCATTAGAAA TGCCAAAGAT CAATCCGCAT ATCGAACGCA TGCAAACGGC CTTGTCAGAA
GCCATGAGCA TTCCCGTAGA AGATATTTCA ATCAAGGCAA CGACAAATGA AAAGCTTGGC
TATGTGGGCC GGGAAGAAGG CGTGAATGCG TACGCGGTAG CATTGTTGAT TAAACCGTAG
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| Protein sequence | MKIKVGFGYD VHQLKEGRPM WLGGIQLEYT KGPDGHSDAD VLIHAICDAI LGAANMRDIG
FHFANTDDRW KGVDSKVLLK EVCRMIREKG WEISNVDASL ALEMPKINPH IERMQTALSE
AMSIPVEDIS IKATTNEKLG YVGREEGVNA YAVALLIKP
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