Gene CHU_3178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3178 
Symbol 
ID4186104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3618970 
End bp3619656 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content36% 
IMG OID638073171 
Producthypothetical protein 
Protein accessionYP_679761 
Protein GI110639551 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.82146 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTATA CAACACAAAA AAACAGTTGG TATTATCTTT CGTTGGTTGT ATCGTATCTT 
CTGCATCCGG TATTTATCCC GACATATATT TTTACCACGT TTTTATTCTT TGGTAATTAT
GTATTTGATC CGTATTCGGA ACATCAGCAG GTGTATGTTG TTGGCCTGAT ATTTATTACT
ACCGCATTGA TCCCTTTGAT CATGCTGAGT TTGAATTTAT TGATCCTGCG CAGAAAAATA
ACAAACGATG AATTGTTAAT GAATTCCAAA CGCGACAGAG TGGTACCTTT TTTTTATGTA
GGTATTTATT ATTGCAGTCT GTCGTATATG TTTTATACGC ATTTAAATTT TCCGTTATTA
TTAACCTGCT TAATGCTTAT CATAAGTGCT GCGGTACTGG TAACGGCCTT TATAAGTTTA
TTCTGGAAAA TAAGTGCGCA TGCACTATCG CTCGGAGCAA GCTTAATGAT CTTTATACTG
ATTCATACCA TCATGCCAAG CGATCATTTT TTATATGTGA TCATGGCAAC ATTATTATTA
AGCGGCATTA CGCTTTCAAG CCGCTTACGG TTAAACGCCC ATACACAGGA ACAAACCTAT
GCAGGCTATT TACTGGGAAT ACTTATCAGC GCGCTTGGTC TTTATTTTTT ACTGCCAAAT
CTTTTTAGTT TTTCATTTAA CCTGTAA
 
Protein sequence
MTYTTQKNSW YYLSLVVSYL LHPVFIPTYI FTTFLFFGNY VFDPYSEHQQ VYVVGLIFIT 
TALIPLIMLS LNLLILRRKI TNDELLMNSK RDRVVPFFYV GIYYCSLSYM FYTHLNFPLL
LTCLMLIISA AVLVTAFISL FWKISAHALS LGASLMIFIL IHTIMPSDHF LYVIMATLLL
SGITLSSRLR LNAHTQEQTY AGYLLGILIS ALGLYFLLPN LFSFSFNL